Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019719.1 Length=41528 Score E Sequences producing significant alignments: (Bits) Value seq1298 517 3e-142 seq33178 96.9 9e-16 >seq1298 Length=11968 Score = 517 bits (572), Expect = 3e-142 Identities = 327/351 (93%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 28622 TTCATTTTCTGGCGACCAACACAAGTCACACCCATTTCACTGCGTGGCTTGCTGTACCAT 28681 || ||||||||||| ||| || || | || ||| || ||||||||||||||| Sbjct 7796 TTAATTTTCTGGCGTCCACTGCATGTTATGCCGCGTTC---GCCAGGCTTGCTGTACCAT 7852 Query 28682 GTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATCTGTTCGTGGTATTCA 28741 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 7853 GTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATCTGTTTGTGGTATTCA 7912 Query 28742 GCCAGCACTGTAAGGTCTATCGGATTCAGTGCGCTTTCTACTCGTGATTTCGGTTTGCGA 28801 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7913 GCCAGCACTGTAAGGTCTATCGGATTTAGTGCGCTTTCTACTCGTGATTTCGGTTTGCGA 7972 Query 28802 TTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCAACTAACAGGGGATTT 28861 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 7973 TTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCAACCAACAGGGGATTT 8032 Query 28862 GCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGGCGTGTTTGTGCATCC 28921 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8033 GCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGGCGTGTTTGTGCATCC 8092 Query 28922 ATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGTGGTGGC--TGGTAGTC 28970 ||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct 8093 ATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGT-GTGGCAGTTGTAGTC 8142 Score = 167 bits (184), Expect = 6e-37 Identities = 94/95 (99%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 29162 CACACCCCAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGC 29221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8223 CACACCCCAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGC 8282 Query 29222 CTCACCTTCATGGTGGTCAGTGCGTCCTGCTGATG 29256 |||||||||||||||||||||||||||||||||| Sbjct 8283 GTCACCTTCATGGTGGTCAGTGCGTCCTGCTGATG 8317 >seq33178 Length=176 Score = 96.9 bits (106), Expect = 9e-16 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 22132 AGGGAATTTTGCGGACTGGTACGGATGGGGGCGAACTGATAAATGGTGTCCCCTGCAG 22189 |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1 AGGGGATTTTGCGGACTGGTACGGATGGGAGCGAACTGATAAATGGTGTCCCCTGCAG 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132710978384460