Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019767.1 Length=40155 Score E Sequences producing significant alignments: (Bits) Value seq1298 1600 0.0 >seq1298 Length=11968 Score = 1600 bits (1774), Expect = 0.0 Identities = 905/917 (99%), Gaps = 0/917 (0%) Strand=Plus/Plus Query 28652 TTACCAGCTATGCGCCGACCAGAACACCTTGCCGATCAGCCAAACGTCTCTTCTGGCCAC 28711 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 9926 TTATCAGCTATGCGCCGACCAGAACACCTTGCCGATCAGCCAAACGTCTCTTCAGGCCAC 9985 Query 28712 TGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCATTGCATGGGATCATTGGATAT 28771 || || |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 9986 TGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCATTGCATGGGATCATTGGGTAC 10045 Query 28772 TGCGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCCCTGATCAGTTTCTTGAAGGTA 28831 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10046 TGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCCCTGATCAGTTTCTTGAAGGTA 10105 Query 28832 AACTCATCACCTCCAAGTCTGGCTATGCAAAAATCACCTGGCTCAACAGCCTGCTCAGGG 28891 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 10106 AACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCTGGCTCAACAGCCTGCTCAGGG 10165 Query 28892 TCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTGGAGCCTGTTGGTGCGGTCATG 28951 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10166 TCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTGGAGCCTGTTGGTGCGGTCATG 10225 Query 28952 GAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGTGCTTACC 29011 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10226 GAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGTGCTTACC 10285 Query 29012 CATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTCAGGTGAGAACATCCCTGCCTGA 29071 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 10286 CATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTAGGTGAGAACATCCCTGCCTGA 10345 Query 29072 ACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGTGACGGCTGCATACTAACCGCT 29131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10346 ACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGTGACGGCTGCATACTAACCGCT 10405 Query 29132 TCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCTTCAACGCTAACTTTG 29191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10406 TCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCTTCAACGCTAACTTTG 10465 Query 29192 AGAATTTTTGCAAGCAATGCGGCGTTATAAGCATTTAATGCATTGATGCCATTAAATAAA 29251 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10466 AGAATTTTTGTAAGCAATGCGGCGTTATAAGCATTTAATGCATTGATGCCATTAAATAAA 10525 Query 29252 GCACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCGACAGATTCCTGGGATAAGCCA 29311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10526 GCACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCGACAGATTCCTGGGATAAGCCA 10585 Query 29312 AGTTCAtttttctttttttCATAAATTGCTTTAAGGCGACGTGCGTCCTCAAGCTGCTCT 29371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10586 AGTTCATTTTTCTTTTTTTCATAAATTGCTTTAAGGCGACGTGCGTCCTCAAGCTGCTCT 10645 Query 29372 TGTGTTAATAGTTTCTTTTTTGTGCTCATACGTTAAATCTATCACCGCAAGGGATAAATA 29431 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10646 TGTGTTAATGGTTTCTTTTTTGTGCTCATACGTTAAATCTATCACCGCAAGGGATAAATA 10705 Query 29432 TCTAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGTGATAATGGTTGCATGTACTAA 29491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10706 TCTAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGTGATAATGGTTGCATGTACTAA 10765 Query 29492 GGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACC 29551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10766 GGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACC 10825 Query 29552 AAGACAGCTAAAGATCT 29568 ||||||||||||||||| Sbjct 10826 AAGACAGCTAAAGATCT 10842 Score = 572 bits (634), Expect = 4e-159 Identities = 331/339 (98%), Gaps = 1/339 (0%) Strand=Plus/Plus Query 27379 CACACCCCAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTAAATTTTTAAGAGC 27438 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 8223 CACACCCCAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGC 8282 Query 27439 CTCACCTTCAATGGTGGTTAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCCAGTGGTA 27498 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 8283 GTCACCTTCA-TGGTGGTCAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCCAGTGGTA 8341 Query 27499 TTTATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGtttttta 27558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8342 TTTATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTTTTTTA 8401 Query 27559 tatgaatttattttttGCAGGGGGGCATTGTTTGGTAGGTGAGAGATCTGAATTGCTATG 27618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8402 TATGAATTTATTTTTTGCAGGGGGGCATTGTTTGGTAGGTGAGAGATCTGAATTGCTATG 8461 Query 27619 TTTAGTGAGTTGTATCTATTAATTTTTCAATAAATACAATTGGTTATGTGTTTTGGGGGC 27678 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 8462 TTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAATTGGTTATGTGTTTTGGGGGC 8521 Query 27679 GATCGTGAGGCAAAGAAAACCCGGCTCTGTGGCCGGATT 27717 ||||||||||||||||||||||||| ||| |||||| || Sbjct 8522 GATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTT 8560 Score = 508 bits (562), Expect = 1e-139 Identities = 325/351 (93%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 26839 TTCATTTTCTGGCGACCAACACAAGTCACACCCATTTCACTGCGTGGCTTGCTGTACCAT 26898 || ||||||||||| ||| || || | || ||| || ||||||||||||||| Sbjct 7796 TTAATTTTCTGGCGTCCACTGCATGTTATGCCGCGTTC---GCCAGGCTTGCTGTACCAT 7852 Query 26899 GTGCGCTGATTCTTGCGCTCAATACGCTGCAGGTTGCTTTCAATCTGTTCGTGGTATTCA 26958 |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 7853 GTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATCTGTTTGTGGTATTCA 7912 Query 26959 GCCAGCACCGTAAGGTCTATCGGATTCAGTGCGCTTTCTACTCGTGATTTCGGTTTGCGA 27018 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7913 GCCAGCACTGTAAGGTCTATCGGATTTAGTGCGCTTTCTACTCGTGATTTCGGTTTGCGA 7972 Query 27019 TTCAGCGAGAGAATAGGGCGGTTAACTGGCTTTGCGCTTACCCCAACCAACAGGGGATTT 27078 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 7973 TTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCAACCAACAGGGGATTT 8032 Query 27079 GCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGGCGTGTTTGTGCATCC 27138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8033 GCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGGCGTGTTTGTGCATCC 8092 Query 27139 ATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGTGGTGGC--TGGTAGTC 27187 ||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct 8093 ATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGT-GTGGCAGTTGTAGTC 8142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128319265361518