Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq1298 1498 0.0 >seq1298 Length=11968 Score = 1498 bits (1660), Expect = 0.0 Identities = 859/878 (98%), Gaps = 0/878 (0%) Strand=Plus/Plus Query 30668 CCAAACGTCTCTTCAGGCCACTGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCA 30727 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 9965 CCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCA 10024 Query 30728 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCACTATCC 30787 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 10025 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 10084 Query 30788 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCT 30847 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10085 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCT 10144 Query 30848 GGCTCAACAGCCTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGAAAACTAGGTTTG 30907 |||||||||||||||||||||||||| ||||||||||| ||||||||||| || || ||| Sbjct 10145 GGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTG 10204 Query 30908 GATCCTGTTGGCGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTG 30967 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10205 GAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTG 10264 Query 30968 GCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTCA 31027 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 10265 GCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTA 10324 Query 31028 GGCGAGAACATCCCGGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGT 31087 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10325 GGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGT 10384 Query 31088 GACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTA 31147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10385 GACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTA 10444 Query 31148 AATTCTTCAACGCTAACGTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCATTTAAT 31207 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 10445 AATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCATTTAAT 10504 Query 31208 GCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGTCCCATCCCCATCTTGTCTGCG 31267 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 10505 GCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCG 10564 Query 31268 ACAGATTCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAATAGCTTTAAGGCGA 31327 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 10565 ACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTAAGGCGA 10624 Query 31328 CGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGTTAAATC 31387 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 10625 CGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGTTAAATC 10684 Query 31388 TATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTAGCGGT 31447 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 10685 TATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGT 10744 Query 31448 GATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTAT 31507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10745 GATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTAT 10804 Query 31508 GCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCT 31545 |||||||||||||||||||||||||||||||||||||| Sbjct 10805 GCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCT 10842 Score = 300 bits (332), Expect = 4e-77 Identities = 233/282 (83%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 28884 TCACCGCCCTGGTGAGTAGTGCGTCCTGCTGATGTGTTTAGTATCACCGCCAGTGGTATT 28943 ||||| | ||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct 8284 TCACCTTCATGGTGGTCAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCCAGTGGTATT 8343 Query 28944 TATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTNNNNNNNN 29003 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8344 TATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTTTTTTATA 8403 Query 29004 NNNNNNNNNNNNNNNGCAGGGGTGTGTGGCTTGGGAGGTGATCGAGAGATCTGAATTGCG 29063 ||||||| | | | |||| |||||| |||||||||||||| Sbjct 8404 TGAATTTATTTTTT-GCAGGGGGGCATTGTTTGGTAGGTGA----GAGATCTGAATTGCT 8458 Query 29064 ATGTTTAGTGAGTTGTATCTATTAATTTTCAAATAAATACAATTGGTTATGTGTTTT-GG 29122 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct 8459 ATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAATTGGTTATGTGTTTTGGG 8518 Query 29123 GGCGAACGTGAGGCAAAGAAAACCCGGCGCGGTGGCCGGGTT 29164 ||||| |||||||||||||||||||||||| | ||||||||| Sbjct 8519 GGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTT 8560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132519060845220