Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019769.1 Length=38964 Score E Sequences producing significant alignments: (Bits) Value seq1298 1543 0.0 >seq1298 Length=11968 Score = 1543 bits (1710), Expect = 0.0 Identities = 872/883 (99%), Gaps = 0/883 (0%) Strand=Plus/Plus Query 27170 ATCACCCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAAC 27229 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9960 ATCAGCCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAAC 10019 Query 27230 TCTCATTGCATGGGATCATTGGGTATTGTGGGTTTAGTGGCTGTAGAAACACCTGACCGC 27289 ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| Sbjct 10020 TCTCATTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGC 10079 Query 27290 TATCCCTGATCAGTTTCTTGAAGGTAAATTCATCACCCCCAAGTCTGGCTATGCAGAAAT 27349 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 10080 TATCCCTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAAT 10139 Query 27350 CACCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTG 27409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10140 CACCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTG 10199 Query 27410 GCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAAT 27469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10200 GCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAAT 10259 Query 27470 CACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAA 27529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10260 CACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAA 10319 Query 27530 GCTCAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTC 27589 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10320 GCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTC 10379 Query 27590 TAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAG 27649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10380 TAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAG 10439 Query 27650 GGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCAT 27709 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 10440 GGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCAT 10499 Query 27710 TTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGT 27769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10500 TTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGT 10559 Query 27770 CTGCGACAGATTCCTGGGGTAAGCCAAGTTCAtttttctttttttCATAAATTGCTTTAA 27829 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 10560 CTGCGACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTAA 10619 Query 27830 GGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGTT 27889 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 10620 GGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGTT 10679 Query 27890 AAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTA 27949 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10680 AAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTG 10739 Query 27950 GCGGTGATAATAGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAG 28009 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10740 GCGGTGATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAG 10799 Query 28010 ATTATGCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCT 28052 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 10800 ATTATGCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCT 10842 Score = 495 bits (548), Expect = 9e-136 Identities = 307/328 (94%), Gaps = 3/328 (1%) Strand=Plus/Plus Query 25332 TTCATTTTCTGGCGACCAACACAAGTCACACCCATTTCACTGCGTGGCTTGCTGTACCAT 25391 || ||||||||||| ||| || || | || ||| || ||||||||||||||| Sbjct 7796 TTAATTTTCTGGCGTCCACTGCATGTTATGCCGCGTTC---GCCAGGCTTGCTGTACCAT 7852 Query 25392 GTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATCTGTTCGTGGTATTCA 25451 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 7853 GTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATCTGTTTGTGGTATTCA 7912 Query 25452 GCCAGCACCGTAAGGTCTATCGGATTCAGTGCGCTGTCTACTCGTGATTTCGGTTTGCGA 25511 |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 7913 GCCAGCACTGTAAGGTCTATCGGATTTAGTGCGCTTTCTACTCGTGATTTCGGTTTGCGA 7972 Query 25512 TTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCAACCAACAGGGGATTT 25571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7973 TTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCAACCAACAGGGGATTT 8032 Query 25572 GCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGGCGTGTTTGTGCATCC 25631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8033 GCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGGCGTGTTTGTGCATCC 8092 Query 25632 ATCTGGATTCTCCTGTCAGTTAGCTTTG 25659 |||||||||||||||||||||||||||| Sbjct 8093 ATCTGGATTCTCCTGTCAGTTAGCTTTG 8120 Score = 480 bits (532), Expect = 2e-131 Identities = 315/343 (92%), Gaps = 11/343 (3%) Strand=Plus/Plus Query 25721 CAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGCATCACCT 25780 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 8230 CAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGCGTCACCT 8289 Query 25781 TCAATGGTGGTCAGTGCGTCCTGCTGATGTGCTTAGTATCACCGCCAGTGGTATTTATGT 25840 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 8290 TCA-TGGTGGTCAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCCAGTGGTATTTATGT 8348 Query 25841 CAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGttttttatatagat 25900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 8349 CAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTTTTTTATATGAAT 8408 Query 25901 ttattttttGCAGGGTTGTGTGGATTGGGAAGGTGATCGAGAGATCTGAATTGCGATGTT 25960 ||||||||||||||| | | | || || |||| |||||||||||||||| ||||| Sbjct 8409 TTATTTTTTGCAGGGGGGCATTG-TTTGGTAGGT----GAGAGATCTGAATTGCTATGTT 8463 Query 25961 TAGTGAGTTGTATCTATTAATTTCCAAATAAATACAATTGGTTATGTGTTCTTGGGTGAG 26020 |||||||||||||||||| |||| |||||||||||||||||||||||| |||| | Sbjct 8464 TAGTGAGTTGTATCTATTTATTTTTCAATAAATACAATTGGTTATGTGTT-TTGG----G 8518 Query 26021 GGGGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTTA 26063 || |||||||||||||||||||||||||||||||||||||||| Sbjct 8519 GGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTTA 8561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124509702207604