Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq919 100 2e-16 seq19782 89.7 4e-13 seq140 89.7 4e-13 seq428 86.0 5e-12 seq6255 84.2 2e-11 seq154 82.4 6e-11 >seq919 Length=36295 Score = 100 bits (110), Expect = 2e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| ||||| || ||||| |||||| |||| || || ||| Sbjct 21663 ATGCAAATCTTCGTCAAAACCTTAACAGGCAAAACAATTACCCTCGAAGTTGAGCCATCA 21722 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | ||||| ||||| ||||| || || | || |||||| Sbjct 21723 GACACAATTGAAAACGTCAAGGCCAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 21782 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731 || | | |||||||| || |||||||| |||||| || || | ||| |||| || | Sbjct 21783 CAACGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGTCGAACATTAT--CCGACTACA 21840 Query 28732 ACATTCAAAAAGAATCTACTCTGCAC 28757 |||||||||||||||| || || ||| Sbjct 21841 ACATTCAAAAAGAATCGACACTCCAC 21866 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || |||||| | || || ||||| || ||| |||| ||||| || Sbjct 21891 ATGCAAATCTTCGTCAAAACACTTACTGGCAAAACAATCACCCTCGAAGTCGAACCATCC 21950 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || |||| || ||||| || || | || ||||| Sbjct 21951 GACACAATTGAAAATGTTAAAGCCAAAATTCAA-GACAAGGAAGGTATTCCACCTGATCA 22009 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 ||| | | |||||||| || |||||||| |||||| || || | ||| |||| || Sbjct 22010 ACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTCGAACATTAT--CCGACTAC 22067 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||||||||||||||| || || ||| |||| Sbjct 22068 AACATTCAAAAAGAATCAACACTTCACTTGGT 22099 Score = 82.4 bits (90), Expect = 6e-11 Identities = 100/133 (75%), Gaps = 5/133 (4%) Strand=Plus/Plus Query 28632 AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCG 28691 ||||||||| || || ||||| || | || || ||||| || | || ||||| Sbjct 19203 AAGCAAAAA-TCCAAGATAAAGAAGGTATTCCACCTGACCAACAACGATTAATTTTTGCT 19261 Query 28692 GGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTA 28749 |||||||||||||||||| || || | ||| |||| || ||||||||||||||||| | Sbjct 19262 GGCAAACAATTGGAAGATGGTCGAACATTAT--CCGACTACAACATTCAAAAAGAATCAA 19319 Query 28750 CTCTGCACATGGT 28762 | || ||| |||| Sbjct 19320 CACTTCACTTGGT 19332 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| ||||| || ||||| || ||| |||| ||||| || Sbjct 19352 ATGCAAATCTTCGTCAAAACCTTAACAGGAAAAACAATCACCCTCGAAGTCGAACCATCC 19411 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | ||||| ||||| ||||| || || | || |||||| Sbjct 19412 GACACAATTGAAAACGTCAAGGCCAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 19471 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTATA 28731 || | | |||||||| || |||||| | |||||| | || | ||| | || || | Sbjct 19472 CAACGTTTGATCTTTGCTGGTAAACAACTTGAAGATGGACGAACATTATCG--GACTACA 19529 Query 28732 ACATTCAAAAAGAATCTACTCTGCAC 28757 |||||||||||||||| || || ||| Sbjct 19530 ACATTCAAAAAGAATCGACACTCCAC 19555 >seq19782 Length=400 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || |||||| | || ||||||||||| || |||| |||||| Sbjct 137 ATGCAAATTTTCGTCAAAACACTCACCGGTAAAACCATCACTCTCGAAGTGGAACCAAGT 196 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | ||||| || ||| |||||||| || | || ||||||| Sbjct 197 GATACTATCGAAAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATTCCACCAGATCAA 256 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGATTATA 28731 || | ||||||||||| ||||||||| | ||||| || | | || | || |||| Sbjct 257 CAACGCCTTATCTTTGCCGGCAAACAACTCGAAGACGGTCGCACATTAAG--TGACTATA 314 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | || ||||| ||||| || || || ||||| | | ||||| || || || Sbjct 315 ATATCCAAAAGGAATCAACACTTCATTTGGTACTTCGTTTACGTGGTGGCAT 366 >seq140 Length=369268 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| ||||| |||||||||||||| ||| ||||| Sbjct 124673 ATGCAAATTTTCGTCAAAACTTTAACTGGTAAAACCATTACACTTGAAGTTGAACCAAGT 124732 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | ||||| ||||| |||||||| || | || |||||| Sbjct 124733 GATACGATCGAAAACGTCAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCTGATCAA 124792 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731 || | ||||| ||||| || |||||| | |||||| || | |||| | ||| |||| Sbjct 124793 CAACGTCTTATTTTTGCCGGTAAACAACTCGAAGATGGTCGTACACTAAG--CGACTATA 124850 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 | |||||||||||| ||| || || Sbjct 124851 ATATTCAAAAAGAAAGTACACTTCA 124875 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| || ||||| ||||| || || ||| ||||| Sbjct 124901 ATGCAAATTTTCGTCAAAACCTTGACGGGCAAAACAATCACACTTGAAGTTGAACCAAGT 124960 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || ||||| |||||| |||||||| || | || |||||| Sbjct 124961 GATACCATCGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGATCAA 125020 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731 || ||||||||||||| || |||||||| |||||| || | ||| | || || | Sbjct 125021 CAACGACTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACACTCAG--TGACTACA 125078 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| ||||||||||| || || || | ||| | | ||||| || || || Sbjct 125079 ACATCCAAAAAGAATCAACCCTTCATTTAGTACTTCGTTTACGTGGTGGTAT 125130 >seq428 Length=150363 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| ||||| |||||||| ||||| |||| ||||| Sbjct 127336 ATGCAAATCTTCGTTAAAACCTTAACTGGTAAAACAATTACACTCGAAGTTGAACCCAGT 127395 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | || || |||| || || || || ||| | || |||||| Sbjct 127396 GACACAATCGAAAACGTTAAAGCTAAAATTCAA-GATAAGGAAGGAATTCCACCAGATCA 127454 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| || | |||||||| || |||||| | ||||| | ||| || |||||| || Sbjct 127455 ACAACGATTGATCTTTGCCGGTAAACAACTCGAAGACGGTCGAACATTGAGCGATTACAA 127514 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||| ||| ||| || || | ||| | ||||||| || || || Sbjct 127515 CATTCAAAAGGAAAGTACACTTCATCTTGTACTTCGATTACGTGGTGGCAT 127565 >seq6255 Length=968 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 28549 TAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAAC 28608 |||| |||||||| || || ||||| | || ||||||||||| || |||| ||||| Sbjct 120 TAAACATGCAAATTTTCGTCAAAACTCTCACCGGTAAAACCATCACTCTCGAAGTGGAAC 179 Query 28609 CTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668 | || || | | | ||||| || ||| || ||||| || | || || Sbjct 180 CAAGTGATACTATCGAAAACGTCAAGGCCAAGATCCAAGATAAAGAAGGCATTCCACCAG 239 Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGA 28726 ||||||| | ||||||||||| ||||||||| | ||||| || | | || | ||| Sbjct 240 ATCAACAACGCCTTATCTTTGCCGGCAAACAACTCGAAGACGGTCGCACATTAAG--CGA 297 Query 28727 TTATAACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 ||||| || ||||| ||||| || || || ||||| Sbjct 298 CTATAATATCCAAAAGGAATCAACACTTCATTTGGTA 334 >seq154 Length=348346 Score = 82.4 bits (90), Expect = 6e-11 Identities = 100/133 (75%), Gaps = 5/133 (4%) Strand=Plus/Plus Query 28632 AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCG 28691 ||||||||| || || ||||| || | || || ||||| || | || ||||| Sbjct 148308 AAGCAAAAA-TCCAAGATAAAGAAGGTATTCCACCTGACCAACAACGATTAATTTTTGCT 148366 Query 28692 GGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTA 28749 |||||||||||||||||| || || | ||| |||| || ||||||||||||||||| | Sbjct 148367 GGCAAACAATTGGAAGATGGTCGAACATTAT--CCGACTACAACATTCAAAAAGAATCAA 148424 Query 28750 CTCTGCACATGGT 28762 | || ||| |||| Sbjct 148425 CACTTCACTTGGT 148437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425217287812293