Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq176 93.3 6e-14 seq8 93.3 6e-14 seq276 89.7 7e-13 seq76 89.7 7e-13 >seq176 Length=322550 Score = 93.3 bits (102), Expect = 6e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 |||||||||||||| ||||| |||||| || ||||| | ||| |||||||| || ||| Sbjct 207708 CCTGTGGCAATAACGAAATCTTCAGGTGTATCATGTTGTAACATCAACCACATTGCTTCG 207649 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACG 47876 | |||||||| ||||||||||| ||||| Sbjct 207648 ATATAATCTCGAGCATGTCCCCAATCACG 207620 >seq8 Length=956989 Score = 93.3 bits (102), Expect = 6e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 |||||||||||||| ||||| |||||| || ||||| | ||| |||||||| || ||| Sbjct 309161 CCTGTGGCAATAACGAAATCTTCAGGTGTATCATGTTGTAACATCAACCACATTGCTTCG 309102 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACG 47876 | |||||||| ||||||||||| ||||| Sbjct 309101 ATATAATCTCGAGCATGTCCCCAATCACG 309073 >seq276 Length=227470 Score = 89.7 bits (98), Expect = 7e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || || |||||||||||||| || ||| | |||||||| | ||||| |||||| || || Sbjct 66423 CCAGTTGCAATAACAAAATCTTCTGGTACATCTTGTTGTAACATTAGCCACATCGCTTCA 66482 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACG 47876 | |||||||| ||||||||||| ||||| Sbjct 66483 ATATAATCTCGTGCATGTCCCCAATCACG 66511 >seq76 Length=478225 Score = 89.7 bits (98), Expect = 7e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || || |||||||||||||| || ||| | |||||||| | ||||| |||||| || || Sbjct 146059 CCAGTTGCAATAACAAAATCTTCTGGTACATCTTGTTGTAACATTAGCCACATCGCTTCA 146118 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACG 47876 | |||||||| ||||||||||| ||||| Sbjct 146119 ATATAATCTCGTGCATGTCCCCAATCACG 146147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665193538300440