Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq306 93.3 5e-14 seq15 89.7 6e-13 seq418 87.8 2e-12 seq140 84.2 3e-11 seq106 84.2 3e-11 >seq306 Length=206829 Score = 93.3 bits (102), Expect = 5e-14 Identities = 192/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 14362 GGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAGAATCTCAA 14421 ||||||||| || || || | ||| | |||| || ||| ||| || ||| | | Sbjct 124013 GGATGGTCTTAAACCAGGTCAACGTAAAATCATGTTTGTTTGTTTCACGAAAAATTTAAT 124072 Query 14422 GGATGAAATGAAGGTGGCACAACT-GGCGGCATATGTCGCGGACAAGTCTGCGTACCACC 14480 |||||| || || |||||| | || |||| | || || || || ||||| || || | Sbjct 124073 ACGTGAAATTAAAGTCGCACAATTAGGTGGCAAA-GTAGCTGAAAATTCTGCTTATCATC 124131 Query 14481 ATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGT-TGGCAAACGACTACACGGGTTCA 14539 |||||||| ||| ||| | | || ||||| | || | ||| | ||| |||||| Sbjct 124132 ATGGTGAACAATCATTAACCAATACAATTGT-AGGTCTTGCACAAAACTTTGTTGGTTCA 124190 Query 14540 AACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCG-TCTCATGGGTGGTAA 14598 || || ||||| |||||| ||| ||||||||||||||| || | ||| ||||||| Sbjct 124191 AATAATATTAATTTTCTTGTACCAGCTGGTCAATTTGGTACACGATTACAT-GGTGGTAG 124249 Query 14599 GGATGCTTCTCAGACGAGGTACATTTTCACAAAACTTA 14636 ||||| || | | || ||||||||| ||||| Sbjct 124250 TGATGCAGCTTCTGCACGTTATATTTTCACACGACTTA 124287 >seq15 Length=819560 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 75872 GATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931 ||| ||||| |||||| |||| |||| | || ||||| ||||||| ||||| || Sbjct 384115 GATCTTTGGTTTGCTATTGTCAATGCACAAATTGAAACTGGTACACCATTCATGCTATAT 384174 Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991 || ||| ||||| || ||||| ||| | || | || ||||| | | |||||| Sbjct 384175 AAAGATCAGTGTAATGCTAAAAGTAATCAACAACATCTTGGTACAATTCATTGTTCAAAT 384234 Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 | || ||||||||| | || || |||| |||| |||||||| ||||||||| Sbjct 384235 TTATGTACGGAAATTATTGAATATACAGCACCAAATGAAGTTGCTGTTTGTAATTTGGCA 384294 Query 76052 TCAATCGCCCTT 76063 ||||| || ||| Sbjct 384295 TCAATTGCACTT 384306 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 75872 GATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931 ||| ||||| |||||| |||| |||| | || ||||| ||||||| ||| | || Sbjct 550718 GATCTTTGGTTTGCTATTGTCAATGCACAAATTGAAACTGGTACACCATTCATGTTATAT 550659 Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991 || ||| ||||| || ||||| ||| | || | || ||||| | | |||||| Sbjct 550658 AAAGATCAGTGTAATGCTAAAAGTAATCAACAACATCTTGGTACAATTCATTGTTCAAAT 550599 Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 | || ||||||||| | || || |||| |||| |||||||| ||||||||| Sbjct 550598 TTATGTACGGAAATTATTGAATATACAGCACCAAATGAAGTTGCTGTTTGTAATTTGGCA 550539 Query 76052 TCAATCGCCCTT 76063 ||||| || ||| Sbjct 550538 TCAATTGCACTT 550527 >seq418 Length=152709 Score = 87.8 bits (96), Expect = 2e-12 Identities = 191/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 14362 GGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAGAATCTCAA 14421 ||||||||| || || || | ||| | |||| || ||| || || ||| | | Sbjct 23523 GGATGGTCTTAAACCAGGTCAACGTAAAATCATGTTTGTTTGTTTTACGAAAAATTTAAT 23582 Query 14422 GGATGAAATGAAGGTGGCACAACT-GGCGGCATATGTCGCGGACAAGTCTGCGTACCACC 14480 |||||| || || |||||| | || |||| | || || || || ||||| || || | Sbjct 23583 ACGTGAAATTAAAGTCGCACAATTAGGTGGCAAA-GTAGCTGAAAATTCTGCTTATCATC 23641 Query 14481 ATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGT-TGGCAAACGACTACACGGGTTCA 14539 |||||||| ||| ||| | | || ||||| | || | ||| | ||| |||||| Sbjct 23642 ATGGTGAACAATCATTAACCAATACAATTGT-AGGTCTTGCACAAAACTTTGTTGGTTCA 23700 Query 14540 AACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCG-TCTCATGGGTGGTAA 14598 || || ||||| |||||| ||| ||||||||||||||| || | ||| ||||||| Sbjct 23701 AATAATATTAATTTTCTTGTACCAGCTGGTCAATTTGGTACACGATTACAT-GGTGGTAG 23759 Query 14599 GGATGCTTCTCAGACGAGGTACATTTTCACAAAACTTA 14636 ||||| || | | || ||||||||| ||||| Sbjct 23760 TGATGCAGCTTCTGCACGTTATATTTTCACACGACTTA 23797 >seq140 Length=369268 Score = 84.2 bits (92), Expect = 3e-11 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 159113 TTATAAACTTTGGAATGAGTTTCTCCGGGTATTGATTTGGACCATAAACATTATTACAGC 159172 ||||||| |||||| | ||| |||| | |||||| ||||||||||||||||||| | Sbjct 192240 TTATAAAACGTGGAATAACTTTTTCCGTGAATTGATACGGACCATAAACATTATTACCAC 192299 Query 159173 GAATTATTTTG-ATATTCATATCAAATGATTCTATATATGAACGGACTATCATTTCGGCC 159231 | ||||| | || | || | ||| ||| |||||| || | | ||| || Sbjct 192300 GTGTTATTACGTATGGTAAT-TTAAAACTTTCACCATATGATTTAACAAGAAATTCAGCA 192358 Query 159232 GCCGCTTTTGATGCTGAATATGGATTTGTTGGTCTAAGTACCCCTGTGTC 159281 || || |||| |||| ||||||||||||||| ||||||| |||| || Sbjct 192359 GCTGCCTTTGTAGCTGCATATGGATTTGTTGGATTAAGTACAGCTGTTTC 192408 >seq106 Length=426470 Score = 84.2 bits (92), Expect = 3e-11 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 159113 TTATAAACTTTGGAATGAGTTTCTCCGGGTATTGATTTGGACCATAAACATTATTACAGC 159172 ||||||| |||||| | ||| |||| | |||||| ||||||||||||||||||| | Sbjct 353479 TTATAAAACGTGGAATAACTTTTTCCGTGAATTGATACGGACCATAAACATTATTACCAC 353420 Query 159173 GAATTATTTTG-ATATTCATATCAAATGATTCTATATATGAACGGACTATCATTTCGGCC 159231 | ||||| | || | || | ||| ||| |||||| || | | ||| || Sbjct 353419 GTGTTATTACGTATGGTAAT-TTAAAACTTTCACCATATGATTTCACAAGAAATTCAGCA 353361 Query 159232 GCCGCTTTTGATGCTGAATATGGATTTGTTGGTCTAAGTACCCCTGTGTC 159281 || || |||| |||| ||||||||||||||| ||||||| |||| || Sbjct 353360 GCTGCCTTTGTAGCTGCATATGGATTTGTTGGATTAAGTACAGCTGTTTC 353311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596299898340960