Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq26295 495 1e-135 seq31060 343 4e-90 seq32719 248 2e-61 seq28989 143 7e-30 >seq26295 Length=286 Score = 495 bits (548), Expect = 1e-135 Identities = 281/286 (98%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 1763 CGCGAGATTGACGGTAAAACGCATTACTACAGTGTGGCCCCGCGTTTCTGGGTACCGTAT 1822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 286 CGCGAGATTGACGGTAAAACGCATTACTACAGTGTGGCCCCGCGTTTCTGGGTACCGTAT 227 Query 1823 GACACGGTGTATAGCGTCGAGAAAAATGAAGATCGCCGGACAGCCGAACGCTTTCAGAAA 1882 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 226 GACACGGTGTACAGCGTCGAGAAAAATGAAGATCGCCGGACAGCCGAACGCTTTCAGAAA 167 Query 1883 TGGGTGGAAATGGGCGTTCTGACCGTTACCGATGGTGCAGAGGTGGATTATCGCTACATC 1942 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 166 TGGGTGGAAATGGGCGTTCTGACCGTTACCGATGGTGCGGAGGTGGATTATCGCTACATC 107 Query 1943 CTCGAAGAGGCCAAAGCGGCGAACAAAATCAGCCCGGTCAGTGAGTCACCCATCGACCCT 2002 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 106 CTCGAAGAGGCCAAAGCGGCGAACAAAATCAGCCCGGTCAGTGAGTCACCCATCGACCCC 47 Query 2003 TTCGGAGCGACCGGGCTGTCACATGACCTTGCTGATGAAGACCTGA 2048 ||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 46 TTCGGGGCSACCGGGCTGTCACATGACCTTGCTGATGAAGACCTGA 1 >seq31060 Length=214 Score = 343 bits (380), Expect = 4e-90 Identities = 201/207 (97%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 31863 TTTTGTGCCTGACCCGCCAGGCGGAAGAACTGGAGTCCAGGGGCTTATACCGTCGTGCTG 31922 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 214 TTTTGTGCCTGACCCGCCAGGCGGAAGAACTGGAGTCCAGGGGCTTATACCGTCGTGCTG 155 Query 31923 CAACGGTGTGGATGGCGGCATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTC 31982 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 154 CAACGGTGTGGATGGCGGCATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTC 95 Query 31983 TGGCGCGTCGTGAACGGTGTTTACGGAAAAGCAGCAAGCGCGCTGTATCAGGTGATGAGT 32042 |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||| Sbjct 94 TGGCGCGTCGTGAACGGTGTTTACGGAAAAGCAGTAAGCGGGCTGCATCAGGTGAAGAGT 35 Query 32043 GGTATCTGTCA-GGAATTACGTGGGGG 32068 ||||||| ||| ||||||||||||||| Sbjct 34 GGTATCTCTCAGGGAATTACGTGGGGG 8 >seq32719 Length=185 Score = 248 bits (274), Expect = 2e-61 Identities = 165/183 (90%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 35078 CAGGGGGGAATGGGTACAAAAGCGCATGATCTCTTTGTGTTGCCTTTGTGCAGAAAGCAT 35137 ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 CAGGGCGGAATGGGAACAAAAGCACATGATCTCTTTGTGTTGCCTTTGTGCAGAAAGCAT 60 Query 35138 CATGACGAGCTGCATGCGGATACCGTGGTATTTGAAGAGAAGTATGGCTCCCAGCTGGAG 35197 || ||||||||||| ||||||| |||| ||||||||| |||||||||||||| |||||| Sbjct 61 CACAACGAGCTGCATACGGATACAGTGGCATTTGAAGATAAGTATGGCTCCCAACTGGAG 120 Query 35198 CTGATATTTCGTTTTATCGATCGTGCGCTGGCAATTGGCGTGCTGGCCTGATTTTGTGGA 35257 ||||||||||||||||||||||| ||||||||||||||||| ||||| | | ||||| Sbjct 121 CTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACTGGCGTAA----GTGGA 176 Query 35258 GAA 35260 ||| Sbjct 177 GAA 179 >seq28989 Length=247 Score = 143 bits (158), Expect = 7e-30 Identities = 79/79 (100%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 39819 TGGCTGATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGCCCGTCTGCCGTCTGGT 39878 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 247 TGGCTGATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGCCCGTCTGCCGTCTGGT 188 Query 39879 TTTTCAGGACGGTTTTTCC 39897 ||||||||||||||||||| Sbjct 187 TTTTCAGGACGGTTTTTCC 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132541451224798