Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq72 107 2e-18 seq1031 105 8e-18 seq168 104 3e-17 seq28 100 4e-16 seq1097 91.5 2e-13 seq68 91.5 2e-13 seq418 82.4 1e-10 seq306 82.4 1e-10 >seq72 Length=498752 Score = 107 bits (118), Expect = 2e-18 Identities = 120/158 (76%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 193439 ACGTATACCTGAAATAGGGGATAAATTTTGTTCA-GGAATGGCCCAAAAAGGAACTTGTG 193497 |||| ||||||||| || |||||||| ||||| || |||| | ||||||| ||||| Sbjct 237286 ACGTCGACCTGAAATTGGAGATAAATTCAGTTCACGGCATGGAC-AAAAAGGTGTTTGTG 237228 Query 193498 GTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTA 193557 || | ||| | |||||||||||||||||| | | || |||||| |||||||||| Sbjct 237227 GTTTAATTGTTCAACAAGAAGATATGCCATTCAATGATTATGGTATGTGTCCAGATATTA 237168 Query 193558 TTATTAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 |||| |||||| || || |||| ||||||| ||| Sbjct 237167 TTATGAATCCACATGGTTATCCAAGTCGAATGACAATT 237130 >seq1031 Length=25413 Score = 105 bits (116), Expect = 8e-18 Identities = 158/224 (71%), Gaps = 8/224 (4%) Strand=Plus/Minus Query 51852 GTTAAAAGACAATTGATGGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 51911 ||| || |||| ||||||||| |||| || |||| ||| | ||||||||| | ||| Sbjct 14559 GTTGAACGACATATGATGGATGATGATTTAGTTGTATTTAATCGTCAACCAACATTACAT 14500 Query 51912 AAAGCTTCTATG----CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAAT 51967 ||| |||||| || | | ||||||||| |||| ||||||| | Sbjct 14499 AAAATGTCTATGATGGCACATCGT----GTTAAAATTTTACCATGGTCAACATTTCGTTT 14444 Query 51968 GAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACA 52027 ||||| | | || | |||||||||||||||||||||| ||||||||||||||||| Sbjct 14443 AAATTTAAGTGTAACATCACCATATAATGCTGATTTTGATGGTGATGAAATGAATTTACA 14384 Query 52028 TGTTCCTCAATCATATGGAGCTACTGCTGAATTACAAGAATTAA 52071 | | || ||||| | ||| | ||||||||| | |||||| Sbjct 14383 TTTACCACAATCTGTCGAAGCAAAAGCTGAATTATCACAATTAA 14340 >seq168 Length=329023 Score = 104 bits (114), Expect = 3e-17 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 193446 CCTGAAATAGGGGATAAATTTTGTTCA-GGAATGGCCCAAAAAGGAACTTGTGGTATGAT 193504 |||||||| || |||||||| ||||| || |||| | ||||||| ||||||| | || Sbjct 256923 CCTGAAATTGGAGATAAATTCAGTTCACGGCATGGAC-AAAAAGGTGTTTGTGGTTTAAT 256865 Query 193505 TTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAA 193564 | | |||||||||||||||||| | | || |||||| |||||||||||||| || Sbjct 256864 TGTTCAACAAGAAGATATGCCATTCAATGATTATGGTATGTGTCCAGATATTATTATGAA 256805 Query 193565 TCCAAATTGTATTCCATCCAGAATGACCATT 193595 |||| || || |||| ||||||| ||| Sbjct 256804 TCCACATGGTTATCCAAGTCGAATGACAATT 256774 >seq28 Length=687549 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 51842 TGGAGACTTGGTTAAAAGACAATTGATGGATGGTGATGATGTACTATTAAATAGGCAACC 51901 |||| || | ||| || ||||| ||||||||| |||| || | || ||| |||| || Sbjct 684148 TGGATACATCGTTGAACGACAAATGATGGATGATGATCTGGTCGTTTTTAATCGGCAGCC 684089 Query 51902 AACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATT 51961 | || | |||||| |||||| | | || ||||||| |||| |||||| Sbjct 684088 ATCATTACATAAAATGTCTATGATGGCTCATCGTGTAAAAATTCTACCATGGTCAACATT 684029 Query 51962 TAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAA 52021 | | ||||||| | | || | | || ||||||||||| ||||| ||||||||||| Sbjct 684028 TCGATTGAATTTATCAGTTACAACGCCTTACAATGCTGATTTCGATGGTGATGAAATGAA 683969 Query 52022 TTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATTACAAGAATTAA 52071 | | ||| | || ||||||| | ||| | || ||| || |||||||| Sbjct 683968 TCTTCATTTACCACAATCATTGGAAGCAAGAGCAGAACTAGCAGAATTAA 683919 >seq1097 Length=20116 Score = 91.5 bits (100), Expect = 2e-13 Identities = 129/181 (71%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 51852 GTTAAAAGACAATTGATGGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 51911 ||| || |||| ||||||||| |||| || |||| ||| | ||||||||| | ||| Sbjct 8798 GTTGAACGACATATGATGGATGATGATTTAGTTGTATTTAATCGTCAACCAACATTACAT 8857 Query 51912 AAAGCTTCTATG----CAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAAT 51967 ||| |||||| || | | ||||||||| |||| ||||||| | Sbjct 8858 AAAATGTCTATGATGGCACATCGT----GTTAAAATTTTACCATGGTCAACATTTCGTTT 8913 Query 51968 GAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACA 52027 ||||| | | || | |||||||||||||||||||||| ||||||||||||||||| Sbjct 8914 AAATTTAAGTGTAACATCACCATATAATGCTGATTTTGATGGTGATGAAATGAATTTACA 8973 Query 52028 T 52028 | Sbjct 8974 T 8974 >seq68 Length=505447 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 51842 TGGAGACTTGGTTAAAAGACAATTGATGGATGGTGATGATGTACTATTAAATAGGCAACC 51901 |||| || | || || ||||| ||||||||| |||| || | || ||| |||| || Sbjct 418754 TGGATACATCGTCGAACGACAAATGATGGATGATGATCTGGTCGTTTTTAATCGGCAGCC 418695 Query 51902 AACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATT 51961 | || | |||||| |||||| | | || ||||||| |||| |||||| Sbjct 418694 ATCATTACATAAAATGTCTATGATGGCTCATCGTGTAAAAATTCTACCATGGTCAACATT 418635 Query 51962 TAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAA 52021 | | ||||||| | | || | | || ||||||||||| ||||| ||||||||||| Sbjct 418634 TCGATTGAATTTATCAGTTACAACGCCTTACAATGCTGATTTCGATGGTGATGAAATGAA 418575 Query 52022 TTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATTACAAGAATTAA 52071 | | ||| | || ||||||| | ||| | || ||| || | |||||| Sbjct 418574 TCTTCATTTACCACAATCATTGGAAGCAAGAGCAGAACTAGCACAATTAA 418525 >seq418 Length=152709 Score = 82.4 bits (90), Expect = 1e-10 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 162998 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAA 163057 ||||| || || |||||| |||| | || || ||| | | | ||| | || |||||| Sbjct 23590 ATTAAAGTCGCACAATTAGGTGGCAAAGTAGCTGAAAATTCTGCTTATCATCATGGTGAA 23649 Query 163058 CAAAATTTATGTGAAACTATAATTAAGT-TTGCCCAAGATTTTGTTGGTACAAATAATAT 163116 ||| ||| | || || | | || |||| ||| | ||||||||| |||||||||| Sbjct 23650 CAATCATTAACCAATACAATTGT-AGGTCTTGCACAAAACTTTGTTGGTTCAAATAATAT 23708 Query 163117 AGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGC 163176 || |||| ||| | ||||||||||||||| ||||| | || |||| ||| | || Sbjct 23709 TAATTTTCTTGTACCAGCTGGTCAATTTGGTACACGATTACATGGTGGTAGTGATGCAGC 23768 Query 163177 GGCATCAAGATATATTT 163193 | || | ||||||| Sbjct 23769 TTCTGCACGTTATATTT 23785 >seq306 Length=206829 Score = 82.4 bits (90), Expect = 1e-10 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 162998 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAA 163057 ||||| || || |||||| |||| | || || ||| | | | ||| | || |||||| Sbjct 124080 ATTAAAGTCGCACAATTAGGTGGCAAAGTAGCTGAAAATTCTGCTTATCATCATGGTGAA 124139 Query 163058 CAAAATTTATGTGAAACTATAATTAAGT-TTGCCCAAGATTTTGTTGGTACAAATAATAT 163116 ||| ||| | || || | | || |||| ||| | ||||||||| |||||||||| Sbjct 124140 CAATCATTAACCAATACAATTGT-AGGTCTTGCACAAAACTTTGTTGGTTCAAATAATAT 124198 Query 163117 AGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGC 163176 || |||| ||| | ||||||||||||||| ||||| | || |||| ||| | || Sbjct 124199 TAATTTTCTTGTACCAGCTGGTCAATTTGGTACACGATTACATGGTGGTAGTGATGCAGC 124258 Query 163177 GGCATCAAGATATATTT 163193 | || | ||||||| Sbjct 124259 TTCTGCACGTTATATTT 124275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634890444146760