Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq3030 136 1e-27 >seq3030 Length=1779 Score = 136 bits (150), Expect = 1e-27 Identities = 271/389 (70%), Gaps = 12/389 (3%) Strand=Plus/Plus Query 18142 GCATCCACGCCAATGTGCGCTTTCATTCCGAAATGCCACTGGTTACCTTTCTTGGTCTGG 18201 ||||| || |||||||| || ||||| || || |||||||| || |||||||||||||| Sbjct 599 GCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGA 658 Query 18202 TGCATCTCGGGGTCGCGCTTGCCGCT-GCCATTCTTGGTCGAGCTGGGCGCGGCAATCAG 18260 |||||||| || ||||| |||| ||| ||||||||||||||||| || |||| | Sbjct 659 TGCATCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAT 717 Query 18261 CGAGGCGTCGACCACCGTGCCCTCTTTGAGCAGGTAGCC--CTTCGCACTGAGTTGCGCG 18318 | ||| ||||||| ||||| | | | || | ||| ||||| | | ||| Sbjct 718 GGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAG-CCAGCG-A 775 Query 18319 TTGACCGTCTGCAGAAATTGCTCGGCCAGTTGGTGTCGCTCCAGCAAGTGCCGAAAGCGC 18378 |||| |||| | ||||| ||||||||| || ||||||||| ||| || || | Sbjct 776 TTGATGGTCTTGAACAATTGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTC 835 Query 18379 AGAATGCTGACCCGGTCCGGCAGTCGGCTTATGC-CTCCCAGCCCCGCGAATTGCCG-AT 18436 | ||| || |||||||||| || ||| | | || || || | || || Sbjct 836 ATGATGGTGGTGCGGTCCGGCAAGGCGC-TATCCAGGGATAACCGGGCAAACAGACGCAT 894 Query 18437 ACAACGGC-ACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTGC 18495 | ||| | |||||||| || ||||||||||| | || |||| | |||| ||| Sbjct 895 GGA--GGCGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGC 952 Query 18496 TGCAGAAAGTGGATGCGCAGCATCGTTTC 18524 |||| |||| ||||| ||||| ||||| Sbjct 953 TGCATGCAGTGAATGCGTAGCATGGTTTC 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127829875636456