Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq106 116 2e-21 seq919 111 1e-19 seq428 111 1e-19 seq140 105 4e-18 seq17103 102 5e-17 seq154 82.4 5e-11 >seq106 Length=426470 Score = 116 bits (128), Expect = 2e-21 Identities = 162/223 (73%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || || || |||||||| || || || ||| ||||| || | || || | ||| Sbjct 417479 ATGAAGTGTACTTTCTTTTTGAATATTATAGTCGCTTAGTGTACGACCATCTTCGAGTTG 417538 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| ||||||||||| | ||| || ||||| | || | |||||||||||| |||||| Sbjct 417539 TTTACCGGCAAAAATAAGACGTTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATTTT 417598 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | | ||| | || | |||||| |||| ||| || |||| || || |||||||| | Sbjct 417599 -AGCCTTAACGTTTTCGATGGTGTCACTTGGTTCAACTTCAAGTGTAATGGTTTTACCAG 417657 Query 33725 TTAACGTTTTTACAAAGATCTGCATAGTTGGTGTGT-TTATCG 33766 |||| ||||| || || || ||||| ||| | | | |||||| Sbjct 417658 TTAAAGTTTTGACGAAAATTTGCATGATTGTTATTTGTTATCG 417700 Score = 100 bits (110), Expect = 2e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 33548 GTAGAGTGCT--CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 || ||||| | ||||||||| || ||||| || |||||| || |||| || | ||| Sbjct 416963 GTGGAGTGTTGACTCTTTTTGAATATTGTAGTCACTGAGTGTTCGACCGTCTTCGAGTTG 417022 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| |||||||| || | || || |||||| | || | |||||||||||| |||||| Sbjct 417023 TTTACCGGCAAAGATAAGGCGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTT 417082 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | | ||| | || | || ||||| | ||| || || | ||||| ||||| || | Sbjct 417083 -AGCCTTAACGTTTTCAATTGTATCGCTAGGTTCAACTTCGAGTGTGATTGTTTTGCCGG 417141 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | || ||||| || || || |||||| Sbjct 417142 TCAAGGTTTTGACGAAAATTTGCATA 417167 >seq919 Length=36295 Score = 111 bits (122), Expect = 1e-19 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 33562 TTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATC 33621 ||||| |||||||| ||||| | ||| || | || ||||||||||| || || || ||| Sbjct 22306 TTTTGAATGTTGTAGTCGGATAATGTTCGACCATCTTCCAATTGTTTACCAGCGAAGATC 22247 Query 33622 AAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC 33681 ||||| || ||||| | || | |||||| ||||| |||||| | || ||||| || Sbjct 22246 AAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTT-GGCTTTAACATTTTC 22188 Query 33682 -ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | |||||| || ||| || || | ||||| ||||| || || | ||||| || || Sbjct 22187 AATTGTGTCGGATGGTTCGACTTCGAGGGTGATTGTTTTGCCAGTAAGTGTTTTGACGAA 22128 Query 33741 GATCTGCATA 33750 ||| |||||| Sbjct 22127 GATTTGCATA 22118 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||| || || || ||||| || ||||||||||| Sbjct 21662 ACCACCACGAAGACGAAGAACCAAATGGAGTGTTGATTCCTTTTGGATATTGTAATCGGA 21603 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| ||| | || || | |||||| || ||||| |||||||| || ||||| | || Sbjct 21602 TAATGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCAGGTGG 21543 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| | | || | || | |||||| || ||| | Sbjct 21542 AATACCTTCCTTGTCTTGAATTTT-GGCCTTGACGTTTTCAATTGTGTCGGATGGTTCGA 21484 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| || || | ||||| || ||||| |||||| Sbjct 21483 CTTCGAGGGTGATTGTTTTGCCAGTAAGTGTTTTGACGAAGATTTGCATA 21434 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || || |||||||| |||||||| ||||| Sbjct 19351 ACCACCACGAAGACGAAGAACCAAGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGA 19292 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || ||||||||||| || |||||||| || || || || || | || Sbjct 19291 TAATGTTCGACCATCTTCCAATTGTTTGCCAGCAAAAATTAATCGTTGTTGGTCAGGTGG 19232 Query 33642 CACACCTTCTTTGTC 33656 | ||||||||| || Sbjct 19231 AATACCTTCTTTATC 19217 >seq428 Length=150363 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || || | || | ||| || || || || ||||| |||||||||||| Sbjct 127562 CCACCACGTAATCGAAGTACAAGATGAAGTGTACTTTCCTTTTGAATGTTGTAATCGCTC 127503 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||| || |||| || | |||||| |||||||| ||||| || || |||||| | || Sbjct 127502 AATGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAGATCAATCGTTGTTGATCTGGTGGA 127443 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || |||||| | || ||| | || | ||||| || | ||| || Sbjct 127442 ATTCCTTCCTTATCTTGAATTTT-AGCTTTAACGTTTTCGATTGTGTCACTGGGTTCAAC 127384 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 127383 TTCGAGTGTAATTGTTTTACCAGTTAAGGTTTTAACGAAGATTTGCAT 127336 >seq140 Length=369268 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||||| | || ||||| || || |||||||| |||||||| || Sbjct 125128 ACCACCACGTAAACGAAGTACTAAATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCACT 125069 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||| || | || || |||||||| || ||||| || | || || ||||| | || Sbjct 125068 GAGTGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGTCGTTGTTGATCAGGTGG 125009 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| ||||| | | |||| || | ||| || |||| ||| | Sbjct 125008 GATACCTTCTTTGTCTTGGATTTT-AGCCTTGACATTTTCGATGGTATCACTTGGTTCAA 124950 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| ||||| || || || ||||| || || || |||||| Sbjct 124949 CTTCAAGTGTGATTGTTTTGCCCGTCAAGGTTTTGACGAAAATTTGCATA 124900 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || || || |||||||| || || || ||| ||||| || | || || | ||| Sbjct 124876 ATGAAGTGTACTTTCTTTTTGAATATTATAGTCGCTTAGTGTACGACCATCTTCGAGTTG 124817 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| ||||||||||| | ||| || ||||| | || | |||||||||||| |||||| Sbjct 124816 TTTACCGGCAAAAATAAGACGTTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATTTT 124757 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | | || | || | || || |||| ||| || |||| || || |||||||| | Sbjct 124756 -AGCCTTGACGTTTTCGATCGTATCACTTGGTTCAACTTCAAGTGTAATGGTTTTACCAG 124698 Query 33725 TTAACGTTTTTACAAAGATCTGCATAGTTGGTGTGT-TTATCGCGCAATAC 33774 |||| ||||| || || || ||||| ||| | | | |||||| ||||| Sbjct 124697 TTAAAGTTTTGACGAAAATTTGCATGATTGTTATTTGTTATCGTTGAATAC 124647 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| |||||||| || |||||| || |||| || | |||||| ||||||||| Sbjct 125609 TCCTTTTGGATGTTGTAGTCACTGAGTGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAA 125550 Query 33619 -ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | || || |||||| | || | |||||||||||| |||||| | | |||| Sbjct 125549 GATAAGGCGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTT-GGCYTTGACAT 125491 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 || | ||| || |||| ||| || |||| || || ||||| || || | ||||| | Sbjct 125490 TTTCAATGGTATCACTTGGTTCGACTTCAAGTGTAATTGTTTTTCCAGTGAGTGTTTTGA 125431 Query 33737 CAAAGATCTGCATA 33750 | || || |||||| Sbjct 125430 CGAAAATTTGCATA 125417 >seq17103 Length=470 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| |||||||| || |||||| || |||| || | |||||| |||||||| Sbjct 204 TCCTTTTGGATGTTGTAGTCACTGAGTGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAG 263 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | || || |||||| | || | |||||||||||| |||||| | || |||| Sbjct 264 ATAAGGCGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTT-GGCTTTGACATT 322 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||| || |||| ||| || |||| || || ||||| || || | ||||| || Sbjct 323 TTCAATGGTATCACTTGGTTCGACTTCAAGTGTAATTGTTTTTCCAGTGAGTGTTTTGAC 382 Query 33738 AAAGATCTGCATA 33750 || || |||||| Sbjct 383 GAAAATTTGCATA 395 >seq154 Length=348346 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || || |||||||| |||||||| ||||| Sbjct 148456 ACCACCACGAAGACGAAGAACCAAGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGA 148397 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || ||||||||||| || |||||||| || || || || || | || Sbjct 148396 TAATGTTCGACCATCTTCCAATTGTTTGCCAGCAAAAATTAATCGTTGTTGGTCAGGTGG 148337 Query 33642 CACACCTTCTTTGTC 33656 | ||||||||| || Sbjct 148336 AATACCTTCTTTATC 148322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328559112104640