Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq417 203 3e-47 seq83 203 3e-47 seq39 132 4e-26 seq163 131 1e-25 seq62 129 5e-25 seq35 123 2e-23 seq6 113 4e-20 seq555 105 5e-18 >seq417 Length=153455 Score = 203 bits (224), Expect = 3e-47 Identities = 249/338 (74%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 43685 GAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTAC 43744 |||||||| || | | ||| | |||||||| |||||||||| |||||| || | || Sbjct 95113 GAAAATCCATCACGTTATGTTCTATTTCCAATAAAATATCATGATATATGGAAATTCTAT 95054 Query 43745 AAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCA 43804 ||| ||| ||| || |||||||| |||||||||||||| | || || | | Sbjct 95053 AAACGTGCATTGGCATCTATTTGGACATGTGAAGAAGTTGATTTAGCCAATGATATGAGA 94994 Query 43805 CATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTTTGGCGTTTT 43862 ||||| | |||| || | ||| || ||||||| | | | || ||||| |||| Sbjct 94993 GATTGGTTACGTTTAACTCCCGATGAACAATATTTTATCAAACAT--GTCTTGGCTTTTT 94936 Query 43863 TTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTC 43922 ||||||| || || || || ||| ||||||||| ||| | ||| | ||||||| Sbjct 94935 TTGCTGCAAGTGATGGTATTGTCGGTGAAAATTTAGTTGAACAATTTTCCGGTGAAGTTC 94876 Query 43923 AATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGG 43982 || |||| |||||||| ||||| || || ||||||||||| || |||||||||||||| | Sbjct 94875 AAATACCTGAAGCACGTTGTTTCTACGGATTTCAAATTGCAATTGAAAATATTCATTCAG 94816 Query 43983 AAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 ||||||| ||| | || || ||||| |||||||||||| Sbjct 94815 AAATGTATAGTTTACTTATTGATACATACATCAAAGAT 94778 >seq83 Length=472686 Score = 203 bits (224), Expect = 3e-47 Identities = 249/338 (74%), Gaps = 4/338 (1%) Strand=Plus/Plus Query 43685 GAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTAC 43744 |||||||| || | | ||| | |||||||| |||||||||| |||||| || | || Sbjct 432454 GAAAATCCATCACGTTATGTTCTATTTCCAATAAAATATCATGATATATGGAAATTCTAT 432513 Query 43745 AAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCA 43804 ||| ||| ||| || |||||||| |||||||||||||| | || || | | Sbjct 432514 AAACGTGCATTGGCATCTATTTGGACATGTGAAGAAGTTGATTTAGCCAATGATATGAGA 432573 Query 43805 CATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTTTGGCGTTTT 43862 ||||| | |||| || | ||| || ||||||| | | | || || || |||| Sbjct 432574 GATTGGTTACGTTTAACTCCCGATGAACAATATTTTATCAAACAT--GTCTTAGCTTTTT 432631 Query 43863 TTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTC 43922 ||||||| || || || || ||| ||||||||| ||| | ||| | ||||||| Sbjct 432632 TTGCTGCAAGTGATGGTATTGTCGGTGAAAATTTAGTTGAACAATTTTCCGGTGAAGTTC 432691 Query 43923 AATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGG 43982 || |||| |||||||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct 432692 AAATACCTGAAGCACGTTGTTTCTATGGATTTCAAATTGCAATTGAAAATATTCATTCAG 432751 Query 43983 AAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 ||||||| ||| | || || ||||| |||||||||||| Sbjct 432752 AAATGTATAGTTTACTTATTGATACATACATCAAAGAT 432789 >seq39 Length=615610 Score = 132 bits (146), Expect = 4e-26 Identities = 300/440 (68%), Gaps = 12/440 (3%) Strand=Plus/Plus Query 40883 TTAT-GGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTACT-CTGATTAT 40940 |||| || ||||| | ||| |||| ||||||||||||| | | |||| | |||||| Sbjct 222519 TTATAGGGTTTCAATGGCGTCATTGTGGAGCAAAATATATCGAT-TGTAAAACGGATTAT 222577 Query 40941 ACCAATAAAGGAATGGATCAA-TTACAGTGCGTTA-TAGATACGATTAAATCCGATCCCG 40998 || | | |||| || |||||| || | || ||| || || ||||||| | ||||| Sbjct 222578 ACAAGTCAAGGTATTGATCAACTTGC--TGAATTAATACGTATGATTAAAACTGATCCAA 222635 Query 40999 ATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGC 41058 || || ||| || | | || || ||||| | | || | |||||| | | Sbjct 222636 ATTCTCGTCGTCTACTTCTTTGTGCATGGAATGTTAATCAATTATCTGAAATGGCACTTC 222695 Query 41059 CACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA--ATGG--TGAACTGTCATGTCAA 41114 |||| |||||| | ||||||| ||| | |||| || || | |||| | || ||| Sbjct 222696 CACCATGTCATGTTCTATGTCAATTTAATGTTT-CATCATCGAATGAATTATCTTGTTTG 222754 Query 41115 TTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCT 41174 ||| |||| | ||| |||| | || || || || || || || || || ||| || Sbjct 222755 ATGTTTCAACGTTCATGTGATTTAGGTCTTGGTGTACCATTCAATATTGCATCGTATTCT 222814 Query 41175 CTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACG 41234 | || || |||||||||||||| || ||||||| ||| ||||| ||| || | | Sbjct 222815 TTACTTACTTATATGATTGCACATGTATGTAATTTAACACCAGGTGATTTTATTTATTCT 222874 Query 41235 TTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAACAACTGACACGA 41294 | || |||| |||| ||||| ||||||| || || || ||| |||||| | ||| Sbjct 222875 ATGGGTGATGCACATGTTTACCTTAATCATATTGAACCTTTACTTGAACAAATTGAACGT 222934 Query 41295 AAACCTAGACCATTTCCAAC 41314 |||| || |||||||||| Sbjct 222935 GAACCACGAACATTTCCAAC 222954 >seq163 Length=332407 Score = 131 bits (144), Expect = 1e-25 Identities = 92/105 (88%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 |||||||||||||| |||||||| ||||| ||||| |||||||| || || ||||||||| Sbjct 173218 GAAGTTCAATTACCTGAAGCACGTTGTTTCTATGGTTTTCAAATAGCAATTGAAAATATT 173277 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 |||||||||||||| ||| | |||| ||||||||||| |||||| Sbjct 173278 CATTCGGAAATGTATAGTTTATTGATTGATACGTACATTAAAGAT 173322 >seq62 Length=528316 Score = 129 bits (142), Expect = 5e-25 Identities = 299/440 (68%), Gaps = 12/440 (3%) Strand=Plus/Plus Query 40883 TTAT-GGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTACT-CTGATTAT 40940 |||| |||||||| | ||| |||| |||||| |||||| | | |||| | |||||| Sbjct 419136 TTATAGGATTTCAATGGCGTCATTGTGGAGCGAAATATATCGAT-TGTAAAACGGATTAT 419194 Query 40941 ACCAATAAAGGAATGGATCAA-TTACAGTGCGTTA-TAGATACGATTAAATCCGATCCCG 40998 || | |||| || |||||| || | || ||| || || ||||||| | ||||| Sbjct 419195 ACAGGTCAAGGTATTGATCAACTTGC--TGAATTAATACGTATGATTAAAACTGATCCAA 419252 Query 40999 ATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGC 41058 || || ||| || | | || || ||||| | | || | |||||| | | Sbjct 419253 ATTCTCGTCGTCTACTTCTTTGTGCATGGAATGTTAATCAATTATCTGAAATGGCACTTC 419312 Query 41059 CACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA--ATGG--TGAACTGTCATGTCAA 41114 |||| |||||| | ||||||| ||| | |||| || || | |||| | || ||| Sbjct 419313 CACCATGTCATGTTCTATGTCAATTTAATGTTT-CATCATCGAATGAATTATCTTGTTTG 419371 Query 41115 TTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCT 41174 ||| |||| | ||| |||| | || || || || || || || || || ||| || Sbjct 419372 ATGTTTCAACGTTCATGTGATTTAGGTCTTGGTGTACCATTCAATATTGCATCGTATTCT 419431 Query 41175 CTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACG 41234 | || || |||||||||||||| || ||||||| ||| ||||| ||| || | | Sbjct 419432 TTACTTACTTATATGATTGCACATGTATGTAATTTAACACCAGGTGATTTTATTTATTCT 419491 Query 41235 TTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAACAACTGACACGA 41294 | || |||| |||| ||||| ||||||| || || || ||| |||||| | ||| Sbjct 419492 ATGGGTGATGCACATGTTTACCTTAATCATATTGAACCTTTACTTGAACAAATTGAACGT 419551 Query 41295 AAACCTAGACCATTTCCAAC 41314 |||| || |||||||||| Sbjct 419552 GAACCACGAACATTTCCAAC 419571 >seq35 Length=642070 Score = 123 bits (136), Expect = 2e-23 Identities = 224/328 (68%), Gaps = 0/328 (0%) Strand=Plus/Plus Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 ||| || ||||| || ||||| |||||| | | || ||| | || |||||| | ||| | Sbjct 219055 TGGTGTTCATGATACAGTTGTAAATCAATTATTATCTAAAATTGATGGTGTTGATCAATT 219114 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730 |||||||||| | ||||||| ||||| ||| | | || | || || || ||||| Sbjct 219115 GAATAATATTCTTATTATTGGAATGACAAATCGTCGTGATATGATTGATGAAGCTTTATT 219174 Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGT 19790 |||||| ||||| | ||| | | || |||||| ||||| || ||| ||| || | Sbjct 219175 ACGACCTGGTCGTCTTGAAGTTCAAATTGAAATTGGTTTACCAGACGAAAATGGTCGATT 219234 Query 19791 GGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAATGACGATGT 19850 |||||||||| || ||||| || | || ||||| | |||| | ||||| Sbjct 219235 ACAAATTTTAAATATTCATACTGCACGATTACGTGAAAATCATAAATTAACTTCGGATGT 219294 Query 19851 AGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCGGCGCAGAACTTGAGGGATT 19910 ||| | ||||| |||| | || | ||| | ||| || |||||| |||| || || Sbjct 219295 TGATTTGAAAGAATTTGCTGAATTAACAAGAAATTTTAGTGGGGCAGAAATTGAAGGTTT 219354 Query 19911 AGTGAGGGCCGCCCAATCAATTGCAATG 19938 ||| | || || |||| |||| ||| Sbjct 219355 AGTACGAGCAGCAACATCATTTGCTATG 219382 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || |||||||| |||||||| |||| | |||||||||| || ||||||||| |||| Sbjct 218757 CCAAAAATTGTCAATGGTCCACAAATTCTTGATAAATATGTTGGAGAATCGGAAGCAAAT 218816 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529 | || | |||||||| |||||||||||| ||||||| Sbjct 218817 ATTCGTAAACTATTTGCTGATGCTGAAGAAGAAGAAAAACG 218857 >seq6 Length=1008552 Score = 113 bits (124), Expect = 4e-20 Identities = 224/330 (68%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 ||| || ||||| || ||||| |||||| | | || ||| |||| |||||| | ||| | Sbjct 802247 TGGTGTTCATGATACAGTTGTTAATCAATTATTATCGAAAATAGATGGTGTTGATCAATT 802306 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730 |||||||||||| | || || ||||| ||| | | || | || || || | || Sbjct 802307 AAATAATATTTTAATCATCGGTATGACAAATCGTCGTGATATGATTGATGAAGCTCTTTT 802366 Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGT 19790 |||||| ||||| | ||| | | || |||||| ||||| |||||| ||| ||| | Sbjct 802367 ACGACCTGGTCGACTTGAAGTTCAAATTGAAATTGGTTTACCAGATGAAAATGGTCGTTT 802426 Query 19791 GGAAATTTTAAACATACATACATCAACC--ATGCGACAAAATAACCTTTTAAATGACGAT 19848 |||| ||||| || |||||| || | | || || |||| |||||| ||| Sbjct 802427 ACAAATCTTAAATATTCATACA--AATCGTTTACGTGAACATAATAAATTAAATTCGGAT 802484 Query 19849 GTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCGGCGCAGAACTTGAGGGA 19908 || || || ||||| || | | || | ||| | ||| || || ||||| || || Sbjct 802485 GTTGACTTAAAAGAATTTTCTGAAATGACAAGAAATTTTAGTGGAGCTGAACTAGAAGGT 802544 Query 19909 TTAGTGAGGGCCGCCCAATCAATTGCAATG 19938 ||||| | || || ||| |||||||| Sbjct 802545 TTAGTTCGAGCTGCAATGTCATTTGCAATG 802574 >seq555 Length=108405 Score = 105 bits (116), Expect = 5e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 ||| || ||||| || ||||| |||||| | | || ||| | || |||||| | ||| | Sbjct 83464 TGGTGTTCATGATACAGTTGTAAATCAATTATTATCTAAAATTGATGGTGTTGATCAATT 83523 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730 |||||||||| | ||||||| ||||| ||| | | || | || || || ||||| Sbjct 83524 GAATAATATTCTTATTATTGGAATGACAAATCGTCGTGATATGATTGATGAAGCTTTATT 83583 Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGT 19790 |||||| ||||| | ||| | | || |||||| ||||| || ||| ||| || | Sbjct 83584 ACGACCTGGTCGTCTTGAAGTTCAAATTGAAATTGGTTTACCAGACGAAAATGGTCGATT 83643 Query 19791 GGAAATTTTAAACATACATAC 19811 |||||||||| || ||||| Sbjct 83644 ACAAATTTTAAATATTCATAC 83664 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || |||||||| |||||||| |||| | |||||||||| || ||||||||| |||| Sbjct 83166 CCAAAAATTGTCAATGGTCCACAAATTCTTGATAAATATGTTGGAGAATCGGAAGCAAAT 83225 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529 | || | |||||||| |||||||||||| ||||||| Sbjct 83226 ATTCGTAAACTATTTGCTGATGCTGAAGAAGAAGAAAAACG 83266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397280807232835