Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq62 87.8 1e-12 seq39 87.8 1e-12 >seq62 Length=528316 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 111707 GTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCC 111766 ||||||| | || ||||| | |||||||| ||||| || ||| ||| || || || | Sbjct 419534 GTAAAGGTTCAATATGATTAAGGTAAACATGTGCATCACCCATAGAATAAATAAAATCAC 419475 Query 111767 AAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGT 111826 || ||| | | ||||||||||| || || |||| | || ||||| | Sbjct 419474 CTGGTGTTAAATTACATACATGTGCAATCATATAAGTAAGTAAAGAATACGATGCAATAT 419415 Query 111827 TAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTAT 111886 | ||||| ||||| || || | ||| | || | |||| | | | ||| |||| || || Sbjct 419414 TGAATGGTACACCAAGACCTAAATCACATGAACGTTGAAACATCAAACAAGATAATTCAT 419355 Query 111887 T---TTGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 | | ||| |||| ||||||||| || |||||||| || || | |||||| Sbjct 419354 TCGATGATGAAACATTAAATTGACATAGAACATGACATGGTGGAAGTGCCAT 419303 >seq39 Length=615610 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 111707 GTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCC 111766 ||||||| | || ||||| | |||||||| ||||| || ||| ||| || || || | Sbjct 222917 GTAAAGGTTCAATATGATTAAGGTAAACATGTGCATCACCCATAGAATAAATAAAATCAC 222858 Query 111767 AAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGT 111826 || ||| | | ||||||||||| || || |||| | || ||||| | Sbjct 222857 CTGGTGTTAAATTACATACATGTGCAATCATATAAGTAAGTAAAGAATACGATGCAATAT 222798 Query 111827 TAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTAT 111886 | ||||| ||||| || || | ||| | || | |||| | | | ||| |||| || || Sbjct 222797 TGAATGGTACACCAAGACCTAAATCACATGAACGTTGAAACATCAAACAAGATAATTCAT 222738 Query 111887 T---TTGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 | | ||| |||| ||||||||| || |||||||| || || | |||||| Sbjct 222737 TCGATGATGAAACATTAAATTGACATAGAACATGACATGGTGGAAGTGCCAT 222686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391772836136221