Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_028660.1 Length=61035 Score E Sequences producing significant alignments: (Bits) Value seq1298 96.9 1e-15 >seq1298 Length=11968 Score = 96.9 bits (106), Expect = 1e-15 Identities = 135/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 16458 CACCACCACAAAAGCCAGTGACAGGTCGTTCTGGCTGGAGGTCAAGGGGCATTCAATGAC 16517 ||| |||| |||||||||||| | |||||||| ||||| | || |||| ||||| Sbjct 10279 CACAACCAAAAAAGCCAGTGATTCTGCATTCTGGCTTGAGGTTGAAGGTAATTCCATGAC 10220 Query 16518 CGCACC-GCAGGGTGGTAAAGCCCAGCTTCCCTGAAGGTATGCTGACTACTCGTTGACCC 16576 |||||| |||| | ||||| ||||| ||||| || ||| | | | ||||||||||| Sbjct 10219 CGCACCAACAGGCT--CCAAGCCAAGCTTTCCTGACGGAATG-TTAATTCTCGTTGACCC 10163 Query 16577 TGAACGGGAAATCGAGGATGGCGATTTTTGCGTGGCCCGAATGAACGGCGATGAATTTAC 16636 ||| | || | ||| || ||||| ||| | ||| || | || ||||| ||||| Sbjct 10162 TGAGCAGGCTGTTGAGCCAGGTGATTTCTGCATAGCCAGACTTGGGGGTGATGAGTTTAC 10103 Query 16637 CTTCAA 16642 |||||| Sbjct 10102 CTTCAA 10097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195106569017038