Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq919 95.1 9e-15 seq154 93.3 3e-14 seq428 87.8 1e-12 seq17103 82.4 5e-11 >seq919 Length=36295 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || ||||| |||||||| ||| || || | || |||||| || Sbjct 21435 ATGCAAATCTTCGTCAAAACACTTACTGGCAAAACAATCACCCTCGAAGTCGAACCATCC 21494 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| | || ||||| ||||| ||||| |||||| |||| || || Sbjct 21495 GACACAATTGAAAACGTCAAGGCCAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 21554 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| || || ||||| || |||||| | || || | ||| | || ||||||||||| Sbjct 21555 CAACGTTTGATCTTTGCTGGTAAACAACTTGAAGATGGACGAACATTATCCGATTACAAT 21614 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||| || || | ||||||||| | ||| | ||||| || Sbjct 21615 ATCCAAAAGGAATCAACACTCCATTTGGTTCTTCGTCTTCGTGGTGG 21661 Score = 93.3 bits (102), Expect = 3e-14 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 || ||| |||||| || ||||||||| |||| || || ||||| ||||||||| Sbjct 19199 GTAAAAGCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAACAACGATTAATTTTT 19258 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGA--GA 27982 || || ||||||||||| || | || | || ||||| |||||||| |||||||| | Sbjct 19259 GCTGGCAAACAATTGGAAGATGGTCGAACATTATCCGACTACAACATTCAAAAAGAATCA 19318 Query 27983 GCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| || |||||| | ||| | ||||| || Sbjct 19319 ACACTT--CACTTGGTTCTTCGTCTTCGTGGTGG 19350 >seq154 Length=348346 Score = 93.3 bits (102), Expect = 3e-14 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 || ||| |||||| || ||||||||| |||| || || ||||| ||||||||| Sbjct 148304 GTAAAAGCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAACAACGATTAATTTTT 148363 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGA--GA 27982 || || ||||||||||| || | || | || ||||| |||||||| |||||||| | Sbjct 148364 GCTGGCAAACAATTGGAAGATGGTCGAACATTATCCGACTACAACATTCAAAAAGAATCA 148423 Query 27983 GCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| || |||||| | ||| | ||||| || Sbjct 148424 ACACTT--CACTTGGTTCTTCGTCTTCGTGGTGG 148455 >seq428 Length=150363 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || |||||||||||||| ||| ||| || | || || ||| | Sbjct 126652 ATGCAAATTTTCGTCAAAACTCTTACTGGAAAAACTATCACTTTGGAAGTTGAACCAAGT 126711 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| | | || |||||| || || || |||||||| |||| || || Sbjct 126712 GACACTATCGAAAACGTCAAAGCCAAGATCCAAGATAAAGAAGGAATTCCACCAGACCAA 126771 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| | || |||||||| |||||| | || |||| || | ||| ||| |||||| Sbjct 126772 CAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGAACATTGAGCGACTACAAC 126831 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 || ||||| || || || | ||| | || | || || ||||| ||| Sbjct 126832 ATTCAAAAGGAAAGTACACTTCATCTTGTACTTCGATTACGTGGTGGC 126879 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/232 (68%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || |||||||||||||| ||| |||||| | || || ||| || Sbjct 128487 ATGCAAATCTTCGTTAAAACTCTTACTGGTAAAACAATTACACTCGAAGTTGAACCCAGT 128546 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| ||||||| || ||| ||||| || || ||||| |||| | Sbjct 128547 GAC-----ACAATCGAAAATGTTAAAGCTAAAATTCAAGATAAGGAAGGAATTCCACCAG 128601 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||||| || || |||||||| |||||| | || |||| || | ||| || | Sbjct 128602 ATCAACAACGATTGATCTTTGCCGGTAAACAACTCGAAGACGGTCGAACATTGAGTGACT 128661 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| ||||| || || || | ||| | || | || || ||||| || Sbjct 128662 ACAACATTCAAAAGGAAAGTACACTCCATCTTGTACTTCGATTACGTGGTGG 128713 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/233 (68%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || ||||| | ||||| ||| |||||| | || || ||| || Sbjct 127336 ATGCAAATCTTCGTTAAAACCTTAACTGGTAAAACAATTACACTCGAAGTTGAACCCAGT 127395 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| ||||||| || ||| ||||| || || ||||| |||| | Sbjct 127396 GAC-----ACAATCGAAAACGTTAAAGCTAAAATTCAAGATAAGGAAGGAATTCCACCAG 127450 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||||| || || |||||||| |||||| | || |||| || | ||| ||||| Sbjct 127451 ATCAACAACGATTGATCTTTGCCGGTAAACAACTCGAAGACGGTCGAACATTGAGCGATT 127510 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||||| ||||| || || || | ||| | || | || || ||||| ||| Sbjct 127511 ACAACATTCAAAAGGAAAGTACACTTCATCTTGTACTTCGATTACGTGGTGGC 127563 >seq17103 Length=470 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || ||||| || ||||| ||| |||||| |||| |||||| | Sbjct 394 ATGCAAATTTTCGTCAAAACACTCACTGGAAAAACAATTACACTTGAAGTCGAACCAAGT 335 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || || | ||| |||||| ||||| |||||||||||| | || || | Sbjct 334 GATACCATTGAAAAT--GTCAAAGCCAAAATTCAAGACAAAGAAGGTATCCCACCAGATC 277 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | || |||||||| |||||| | || |||| || | | || |||| Sbjct 276 AACAACGCCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGAACACTCAGTGACTACA 217 Query 27968 ACATCCAAAAAGA 27980 |||||||||| || Sbjct 216 ACATCCAAAAGGA 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355705541080809