Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq417 208 1e-48 seq83 208 1e-48 seq15 116 5e-21 seq163 111 2e-19 >seq417 Length=153455 Score = 208 bits (230), Expect = 1e-48 Identities = 247/335 (74%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460 |||||| | ||| ||||| || | | |||||||||||| || ||||||||||||||||| Sbjct 94778 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 94837 Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC 48520 || ||||||||||| ||||| | ||||| | || || || || ||||| |||| Sbjct 94838 AATTTGAAATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 94897 Query 48521 AGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAAT 48580 | | ||||| ||| || || |||||||| ||||||||||| || || |||||||| || Sbjct 94898 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGAT 94957 Query 48581 AAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTAC 48640 |||||||| ||| | || ||| | ||| || | ||||| || | || ||| || Sbjct 94958 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 95017 Query 48641 TTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTA 48700 ||||||| |||||||| |||||| ||| |||||| | |||||||||||| || Sbjct 95018 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 95077 Query 48701 TTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 || ||||| || | |||| | | |||||||| Sbjct 95078 TTTTATTGGAAATAGAACATAACGTGATGGATTTT 95112 >seq83 Length=472686 Score = 208 bits (230), Expect = 1e-48 Identities = 247/335 (74%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460 |||||| | ||| ||||| || | | |||||||||||| || ||||||||||||||||| Sbjct 432789 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 432730 Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC 48520 || |||||||| || ||||| | ||||| | || || || || ||||| |||| Sbjct 432729 AATTTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 432670 Query 48521 AGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAAT 48580 | | ||||| ||| || || |||||||| ||||||||||| ||||| |||||||| || Sbjct 432669 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGAT 432610 Query 48581 AAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTAC 48640 |||||||| ||| | || ||| | ||| || | ||||| || | || ||| || Sbjct 432609 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 432550 Query 48641 TTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTA 48700 ||||||| |||||||| |||||| ||| |||||| | |||||||||||| || Sbjct 432549 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 432490 Query 48701 TTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 || ||||| || | |||| | | |||||||| Sbjct 432489 TTTTATTGGAAATAGAACATAACGTGATGGATTTT 432455 >seq15 Length=819560 Score = 116 bits (128), Expect = 5e-21 Identities = 161/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 77123 TATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 77182 || ||||||||| ||||| | ||| | || ||| | ||| |||||||||||||| | Sbjct 384989 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 384930 Query 77183 AGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAA 77242 ||||| ||||| || | |||||| || |||||||| |||||||| ||||| | |||||| Sbjct 384929 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 384870 Query 77243 ACTATTTCTGAG-ACCATGTGTTCTGAT-TTTATCT-TTTAGATATTTCCAATCCCAAAG 77299 |||||| | ||| |||| | || ||| | | || || | | |||||| |||| | Sbjct 384869 ACTATTAC-GAGTACCA--TATTGAGATATCTGACTACGAAGTTCTGTCCAATTCCAACG 384813 Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAAT 77338 || || ||| |||| ||| | ||| |||||||||| Sbjct 384812 ATTGGATGGTGTTACATTCCACATATCAAATTGTAGAAT 384774 Score = 116 bits (128), Expect = 5e-21 Identities = 161/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 77123 TATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 77182 || ||||||||| ||||| | ||| | || ||| | ||| |||||||||||||| | Sbjct 549844 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 549903 Query 77183 AGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAA 77242 ||||| ||||| || | |||||| || |||||||| |||||||| ||||| | |||||| Sbjct 549904 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 549963 Query 77243 ACTATTTCTGAG-ACCATGTGTTCTGAT-TTTATCT-TTTAGATATTTCCAATCCCAAAG 77299 |||||| | ||| |||| | || ||| | | || || | | |||||| |||| | Sbjct 549964 ACTATTAC-GAGTACCA--TATTGAGATATCTGACTACGAAGTTCTGTCCAATTCCAACG 550020 Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAAT 77338 || || ||| |||| ||| | ||| |||||||||| Sbjct 550021 ATTGGATGGTGTTACATTCCACATATCAAATTGTAGAAT 550059 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 78402 CCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTAT 78461 |||||||| || | ||| || | |||||| |||||||||||||| || | || ||||||| Sbjct 383354 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 383295 Query 78462 GTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521 ||||||||||| || || || || |||||| || || || |||||||| | |||| Sbjct 383294 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 383235 Query 78522 TGCTGAGGTCTTTCAAC 78538 || || |||| |||||| Sbjct 383234 TGTTGTGGTCGTTCAAC 383218 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 78402 CCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTAT 78461 |||||||| || | ||| || | |||||| |||||||||||||| || | || ||||||| Sbjct 551482 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 551541 Query 78462 GTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521 ||||||||||| || || || || |||||| || || || |||||||| | |||| Sbjct 551542 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 551601 Query 78522 TGCTGAGGTCTTTCAAC 78538 || || |||| |||||| Sbjct 551602 TGTTGTGGTCGTTCAAC 551618 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| | ||||||||||| || ||||| | | || || || |||||||||| Sbjct 549427 TCCAAGCATAGAAATGCATTGATGAGAGTTTATTCATAGTTGGTTCAGCAATATGAATAT 549486 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 | | || ||| |||||| |||||||| || | |||||| ||||| || ||||| | Sbjct 549487 TTAATGATTGAGATTGATCAATGAAAGCACCACGATCAGCAGCCATGTTAATAATAACTT 549546 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 |||| ||||||||||| | ||||| | | |||||||| |||||||| Sbjct 549547 TTTGTGGAATTTCCCAGACTGTTTTATATAACGCTTTGATATGATCTGGAA 549597 Score = 91.5 bits (100), Expect = 2e-13 Identities = 129/181 (71%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 77363 ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTA 77422 |||||||||||| || || | ||| |||| ||||||||| |||| ||||| | || Sbjct 384683 ATATGTTTCATATGGACCATTGATTTTAGCTGATTCACAACTTGCTTTTAATGCAGCATA 384624 Query 77423 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATA 77482 |||||||||||||||||| | ||| || | ||| ||||| ||| || || ||| | Sbjct 384623 ATAAATTGTTTCGAAAATATCACGATTAAGTTGTTGAGCTTCTTCACTTTCGAATGGAAA 384564 Query 77483 ----ATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 || || ||||| | ||| || | || ||||| ||||||||||| || | || Sbjct 384563 TCGCATCAAACAGAAT----GTATCAGCAAGACCTTGAACACCAATACCAATTGGACGAT 384508 Query 77539 G 77539 | Sbjct 384507 G 384507 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 77363 ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTA 77422 |||||||||||| || || | | | |||| ||||||||| |||| ||||| | || Sbjct 550150 ATATGTTTCATATGGACCATTAATCTTAGCTGATTCACAACTTGCTTTTAATGCAGCATA 550209 Query 77423 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATA 77482 |||||||||||||||||| | ||| || | ||| ||||| ||| || || ||| | Sbjct 550210 ATAAATTGTTTCGAAAATATCACGATTAAGTTGTTGAGCTTCTTCACTTTCGAATGGAAA 550269 Query 77483 ----ATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 || || ||||| | ||| || | || ||||| ||||||||||| || | || Sbjct 550270 TCGCATCAAACAGAAT----GTATCAGCAAGACCTTGAACACCAATACCAATTGGACGAT 550325 Query 77539 GTCTCTTATTGGAAATTTTAGC 77560 | | ||| ||| |||||| Sbjct 550326 GACGAAGATTAGAATCTTTAGC 550347 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| | ||||||||||| || ||||| | | || || || |||||||||| Sbjct 385411 TCCAAGCATAGAAATGCATTGATGAGAGTTTATTCATAGTTGGTTCAGCAATATGAATAT 385352 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 | | || || |||||| || ||||| || | |||||| ||||| || ||||| | Sbjct 385351 TTAATGATTGTGATTGATCAATAAAAGCACCACGATCAGCAGCCATGTTAATAATAACTT 385292 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 |||| ||||||||||| | ||||| | | | ||| |||| |||||||| Sbjct 385291 TTTGTGGAATTTCCCAGACTGTTTTATATAATGCTTTAATATGATCTGGAA 385241 >seq163 Length=332407 Score = 111 bits (122), Expect = 2e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 48537 ACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTG 48596 || |||||||| || || ||||| || ||||| |||| ||| |||||||||| ||| | Sbjct 173116 ACAATTCCATCGCTTGCTGCAAAGAAGGCTAAGACATTTTTGATAAAATATTGTTCATCA 173057 Query 48597 GAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656 || || | || |||| || || ||||| |||| || ||| ||||||||| ||||||| Sbjct 173056 GACGTTAAATTTATCCAATCTTTCATATCATTTGCTAAATCAACTTCTTCACATGTCCAA 172997 Query 48657 AATGATGCCTCTGCTTTTTTATACATATTCCATATATCA 48695 | ||||| ||| |||||| ||||||||||||| Sbjct 172996 ACAGATGCTAATGCACGTTTATAATAATTCCATATATCA 172958 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460 |||||||| ||| ||||| || || | |||||||||||| || ||||||||||||||||| Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTC 48490 || ||||| || || ||||| | ||||| Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTC 173233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694354748918880