Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq1298 185 2e-42 seq29063 131 4e-26 >seq1298 Length=11968 Score = 185 bits (204), Expect = 2e-42 Identities = 247/348 (71%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 31721 TCGTTACATGGCATTATTGGGAACTGAGGGTTTAGCGGTTGTAGGAATACTTGTCCGCTG 31780 || || ||||| || |||||| |||| |||||||| ||||||| || || || ||||| Sbjct 10022 TCATTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTA 10081 Query 31781 TCTTTGATGAGCTTCTTAAAAGTGAACTCATCACCACATAACCTTGCAATGCAAAAATCG 31840 || |||| || ||||| || || ||||||||||| | | || || ||||| ||||| Sbjct 10082 TCCCTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCA 10141 Query 31841 CCTGGGTCTACAGGAACTTNNNNNNNNNNNNNNATCAGCATTCCTTCAGGAAAGCTTGGT 31900 ||||| || |||| | || | |||||| |||||||||||||| Sbjct 10142 CCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGC 10201 Query 31901 CGTGATCCCGCTGGAGCCGTCATTGAGTGGCCTTCAACTTCAAGCCAAAAAGATGAATCA 31960 || || | ||| || ||||| || | |||||||| |||||||| || | |||||| Sbjct 10202 TTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCA 10261 Query 31961 CTGGCTTTTTTGGTCGTACTAATCCAGCATTCTGCATCTCTCTCGGTGAATGTGCGAAAT 32020 |||||||||||||| || || | ||| | || ||||| | | ||| || || | || Sbjct 10262 CTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGC 10321 Query 32021 TCTGGTGTAAACATTCCAGCCTGAACGTGAGAGAAGAATGGGTATTCA 32068 | |||| ||||| || |||||||| ||||| || | ||||| ||| Sbjct 10322 TTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCA 10369 >seq29063 Length=246 Score = 131 bits (144), Expect = 4e-26 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26686 GTGAACCGATCCTGTCTGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGA 26745 ||| | |||||||| | | |||||| |||||| | || |||| | ||||| | | Sbjct 246 GTGTAGCGATCCTGACCGGATTGATCGGTCCATTTACGGGTACGCAGCTGACCTTCGATA 187 Query 26746 TAAACCTCAGAACCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATT 26805 ||||||| ||||||||| |||||||| ||||| || | |||||||||||| ||| || Sbjct 186 TAAACCTGAGAACCTTTACGCAGATATTCGCTCGCCACTTCTGCCAGTTTGCCGAACAGC 127 Query 26806 ACCACACGGTGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGT 26865 || || |||||||| || ||||| || || ||| || || ||||||||||| | Sbjct 126 ACAACGCGGTGCCATTCAGTCTGTTCTTTCATCTCGCCGGTCGCTTTATCACGCCAGGAT 67 Query 26866 TCTGACGTAGCAACTGTAAGGTTTGCAAATGC 26897 || || ||||| | |||| ||| |||| ||| Sbjct 66 TCGGAAGTAGCCAGCGTAATGTTGGCAACTGC 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129240469549870