Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq83 255 6e-63 seq417 251 7e-62 seq18078 244 1e-59 seq31712 239 5e-58 seq163 138 1e-27 seq11526 89.7 5e-13 >seq83 Length=472686 Score = 255 bits (282), Expect = 6e-63 Identities = 245/314 (78%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || ||||||||||| ||||||||||||||||| ||||||||||||||||| || Sbjct 432789 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 432730 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 ||| ||||| ||||| ||||| | ||||||| | |||||| ||| ||||| || Sbjct 432729 AATTTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 432670 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | |||||||||| |||||||||||||| |||||||| ||||| | |||| ||| || Sbjct 432669 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGAT 432610 Query 23952 AAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAAC 24011 ||||| | |||||| | | ||| | |||||| | ||||| || | ||||||||| Sbjct 432609 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 432550 Query 24012 TTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATG 24071 ||| ||| |||||||| | |||||| ||||| ||||| | | ||| ||||||| || Sbjct 432549 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 432490 Query 24072 TTGTATTGGAAATA 24085 || ||||||||||| Sbjct 432489 TTTTATTGGAAATA 432476 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/142 (76%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 23156 TTTTTTAAAAATCTTCATCTAAAGTGAATTTCACTGCT-TTATCACTATTCATAACACCC 23214 ||||||||||||| |||| | || || || | | |||| | | ||||||||| Sbjct 433566 TTTTTTAAAAATCAGCATCAAGTGTTAACTTATGTTCAGTTATTGC-AGCCATAACACCA 433508 Query 23215 ATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATG-ATAT 23273 | |||||| || ||||||||| ||||||| |||||||| |||||| ||||| |||| Sbjct 433507 GCTCGTTGATAATCACCAACACGTTTTTCGAAGAAATTTGTTTTACCCG-TAATGGATAT 433449 Query 23274 ATTTTCCATAAAATCAAATGGA 23295 ||| | |||||||||||| ||| Sbjct 433448 ATTATTCATAAAATCAAACGGA 433427 >seq417 Length=153455 Score = 251 bits (278), Expect = 7e-62 Identities = 244/314 (78%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || ||||||||||| ||||||||||||||||| ||||||||||||||||| || Sbjct 94778 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 94837 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 ||| ||||| || || ||||| | ||||||| | |||||| ||| ||||| || Sbjct 94838 AATTTGAAATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 94897 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | |||||||||| |||||||||||||| |||||||| ||||| | |||| ||| || Sbjct 94898 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGAT 94957 Query 23952 AAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAAC 24011 ||||| | |||||| | | ||| | |||||| | ||||| || | ||||||||| Sbjct 94958 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 95017 Query 24012 TTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATG 24071 ||| ||| |||||||| | |||||| ||||| ||||| | | ||| ||||||| || Sbjct 95018 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 95077 Query 24072 TTGTATTGGAAATA 24085 || ||||||||||| Sbjct 95078 TTTTATTGGAAATA 95091 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/142 (76%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 23156 TTTTTTAAAAATCTTCATCTAAAGTGAATTTCACTGCT-TTATCACTATTCATAACACCC 23214 ||||||||||||| |||| | || || || | | |||| | | ||||||||| Sbjct 94003 TTTTTTAAAAATCAGCATCAAGTGTTAACTTATGTTCAGTTATTGC-AGCCATAACACCA 94061 Query 23215 ATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATG-ATAT 23273 | |||||| || ||||||||| ||||||| |||||||| |||||| ||||| |||| Sbjct 94062 GCTCGTTGATAATCACCAACACGTTTTTCGAAGAAATTTGTTTTACCCG-TAATGGATAT 94120 Query 23274 ATTTTCCATAAAATCAAATGGA 23295 ||| | |||||||||||| ||| Sbjct 94121 ATTATTCATAAAATCAAACGGA 94142 >seq18078 Length=442 Score = 244 bits (270), Expect = 1e-59 Identities = 168/188 (89%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 8425 TCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAAT 8484 |||||||||||||||| |||||||||||| ||||||| ||||||||||| |||||| Sbjct 442 TCCTGCCTCAGCCTCCCGAGTAGCTGGGACGACAGGCACCCGCCACCACGCCCGGCTAAT 383 Query 8485 TTTT-GTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 |||| |||||||||||||||| |||||||||| |||| |||||| ||||||||| |||| Sbjct 382 TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCC 323 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 322 TGACCTC--GTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 265 Query 8604 ACCGCGCC 8611 || ||||| Sbjct 264 ACYGCGCC 257 >seq31712 Length=203 Score = 239 bits (264), Expect = 5e-58 Identities = 175/204 (86%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 8393 TGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGG 8452 ||||||||| ||||||| || |||| |||||| ||||| |||||| ||||||||||| Sbjct 203 TGCAACCTCTGCCTCCCAGGCTCAAATGATTCTCTTGCCTTGGCCTCCCGAGTAGCTGGG 144 Query 8453 ATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTT 8512 |||||||| || ||||||||| |||||||||||||||||||||||||| |||||| Sbjct 143 ATTACAGGTGTCCGC-ACCACGCCAGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT 85 Query 8513 CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCC 8572 | ||| ||||||||||||||| ||||||||||||||| |||||||||| | || ||| Sbjct 84 CRYCATRTTGGCCAGGCTGGTCCTGAACTCCTGACCTCAGGTGATCCACCCACTTCAGCC 25 Query 8573 TCCCAAAGTGCTGGGATTACAGGC 8596 |||||||||||||||||||||||| Sbjct 24 TCCCAAAGTGCTGGGATTACAGGC 1 >seq163 Length=332407 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 23894 CTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAA 23953 |||||||||| |||||| ||||| || || |||||||| || | |||| ||| |||| Sbjct 173130 CTAAATTTTCTCCAACAATTCCATCGCTTGCTGCAAAGAAGGCTAAGACATTTTTGATAA 173071 Query 23954 AATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTT 24013 ||| | |||||||| | ||| ||| ||||||| || ||||| |||| ||||||||||| Sbjct 173070 AATATTGTTCATCAGACGTTAAATTTATCCAATCTTTCATATCATTTGCTAAATCAACTT 173011 Query 24014 CATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTA-GCCAAATATCATTATGT 24072 | ||| |||||||| | ||| || ||||| ||||| || | ||| |||||| || | Sbjct 173010 CTTCACATGTCCAAACAGATGCTAATGCACGTTTATA-ATAATTCCATATATCAGGATAT 172952 Query 24073 TGTATTGGAAATA 24085 ||| ||||||| Sbjct 172951 CTTATGGGAAATA 172939 Score = 109 bits (120), Expect = 6e-19 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || || |||||||| | ||||||||||||||| ||||||||||||||||| || Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATC 23876 || ||||| ||||| ||||| | ||||||| |||||||| || Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTCAGGTAATTGAACTTC 173218 >seq11526 Length=655 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 23982 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGC 24041 |||||| | ||||| || | |||||||||||| ||| |||||||| | |||||| || Sbjct 648 CCAATCTCTCATATCATTGGCTAAATCAACTTCTTCACATGTCCAAATAGATGCCAATGC 589 Query 24042 ACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATA 24085 ||| ||||| | | ||| ||||||| || || ||||||||||| Sbjct 588 ACGTTTATAGAATTTCCATATATCATGATATTTTATTGGAAATA 545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521252241793800