Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq6 123 3e-23 seq35 111 2e-19 seq555 105 9e-18 >seq6 Length=1008552 Score = 123 bits (136), Expect = 3e-23 Identities = 133/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 155871 TTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAAC 155930 ||||| ||||| | ||| || |||||||| ||||| |||||||| || | | ||| | Sbjct 802438 TTTAAGATTTGTAAACGACCATTTTCATCTGGTAAACCAATTTCAATTTGAACTTCAAGT 802379 Query 155931 CGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATT 155990 || ||||||| ||| | ||||| ||||| | || | | || |||||||| |||||| Sbjct 802378 CGACCAGGTCGTAAAAGAGCTTCATCAATCATATCACGACGATTTGTCATACCGATGATT 802319 Query 155991 AAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 ||||| || ||||| || ||||| |||||||| || ||||||||||| || || Sbjct 802318 AAAATATTATTTAATTGATCAACACCATCTATTTTCGATAATAATTGATTAACAAC 802263 >seq35 Length=642070 Score = 111 bits (122), Expect = 2e-19 Identities = 206/300 (69%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 155751 GCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGTTTCAACGGCTATT 155810 || || ||||| || ||||| | ||| || || || ||||| | ||| | || | | Sbjct 219366 GCTGCTCGTACTAAACCTTCAATTTCTGCCCCACTAAAATTTCTTGTTAATTCAGCAAAT 219307 Query 155811 TTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGATTTCATTTTA----GCAACGTG 155866 | || || || || || |||| |||| || ||| ||||| | | ||| || Sbjct 219306 TCTTTCAAATCAACATCCGAAGTTAAT---TTATGAT-TTTCACGTAATCGTGCAGTATG 219251 Query 155867 CACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTC 155926 | ||||||||||| | || || ||||| || ||||| |||||||| || | | ||| Sbjct 219250 AATATTTAAAATTTGTAATCGACCATTTTCGTCTGGTAAACCAATTTCAATTTGAACTTC 219191 Query 155927 CAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTAT 155986 | || ||||||| |||||| ||||| ||||| | || | | || ||||| || || Sbjct 219190 AAGACGACCAGGTCGTAATAAAGCTTCATCAATCATATCACGACGATTTGTCATTCCAAT 219131 Query 155987 GATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || | ||| || || || || ||||| || |||||||| ||||||||||| || || Sbjct 219130 AATAAGAATATTATTCAATTGATCAACACCATCAATTTTAGATAATAATTGATTTACAAC 219071 >seq555 Length=108405 Score = 105 bits (116), Expect = 9e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 155871 TTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAAC 155930 ||||||||||| | || || ||||| || ||||| |||||||| || | | ||| | Sbjct 83655 TTTAAAATTTGTAATCGACCATTTTCGTCTGGTAAACCAATTTCAATTTGAACTTCAAGA 83596 Query 155931 CGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATT 155990 || ||||||| |||||| ||||| ||||| | || | | || ||||| || || || Sbjct 83595 CGACCAGGTCGTAATAAAGCTTCATCAATCATATCACGACGATTTGTCATTCCAATAATA 83536 Query 155991 AAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 | ||| || || || || ||||| || |||||||| ||||||||||| || || Sbjct 83535 AGAATATTATTCAATTGATCAACACCATCAATTTTAGATAATAATTGATTTACAAC 83480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666773623640520