Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq679 96.9 3e-15 seq20 91.5 1e-13 seq428 87.8 2e-12 >seq679 Length=77933 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 41630 TCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAG 41689 ||| | || || |||| ||| | |||| ||| || || ||||| || ||||| ||| Sbjct 32901 TCAGCACCACCACGTAAACGAAGTACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAG 32842 Query 41690 TCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC 41749 || | ||||| | || ||||| || ||||||||||| || ||||| ||||| || Sbjct 32841 TCACTTAATGTGCGACCATCTTCGAGTTGTTTGCCGGCGAAGATGAGGCGTTGTTGATCT 32782 Query 41750 GCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGA 41808 | |||| || || |||| | || | || || | ||| | | ||| || || | Sbjct 32781 GGTGGAATGCCTTCTTTGT-CTTGGATCTTGGCCTTGACGTTTTCGATAGTATCACTTGG 32723 Query 41809 CTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| |||| || || ||||| || ||||| || || |||||||| |||||||| Sbjct 32722 TTCCACTTCCAAAGTGATGGTTTTGCCGGTCAGAGTTTTGACGAAAATTTGCATGTT 32666 >seq20 Length=760496 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||| ||| | |||| ||| || || ||||| || || |||||||| Sbjct 309279 GCCACCACGTAAACGAAGTACCAAATGAAGTGTTGATTCCTTTTGGATATTATAGTCACT 309338 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||||| |||| ||||| ||||||||||| || || ||||| ||||| || | || Sbjct 309339 TAATGTGCGACCGTCTTCGAGTTGCTTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGG 309398 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || || ||| | || | || || | ||| | | ||| || || | |||| Sbjct 309399 AATGC-CTTCTTTATCTTGGATCTTGGCCTTGACGTTTTCGATAGTATCACTTGGTTCCA 309457 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | || | || || |||||||| || || || || |||||||| |||||||| Sbjct 309458 CTTCGAGAGTGATGGTTTTACCGGTGAGAGTTTTGACGAAAATTTGCATGTT 309509 >seq428 Length=150363 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 || || || || ||||| |||||||| ||||| | || || |||| ||||| || Sbjct 127310 TGAAGTGTACTTTCCTTTTGAATGTTGTAGTCACTTAACGTTCGACCGTCTTCGAGTTGT 127251 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTT 41779 || ||||| || || || || ||||| || | |||| | ||||| || ||| |||| Sbjct 127250 TTACCGGCAAAGATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTTATCT-TGAATTTT 127192 Query 41780 TGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGT 41838 |||| |||| | | ||||| || | ||| || || | || || |||||||| || Sbjct 127191 AGCTTTAACGTTTTCGATTGTGTCACTGGGCTCAACTTCGAGTGTAATTGTTTTACCAGT 127132 Query 41839 CAGCGTCTTTACGAAAATCTGCATG 41863 | || || ||||||||||||||| Sbjct 127131 TAAGGTTTTAACGAAAATCTGCATG 127107 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 || || || || ||||| |||||||| ||||| | || || |||| ||||| || Sbjct 127994 TGAAGTGTACTTTCCTTTTGAATGTTGTAGTCACTTAACGTCCGACCGTCTTCGAGTTGT 127935 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTT 41779 || ||||| || || || || ||||| || | |||| | ||||| || ||| |||| Sbjct 127934 TTACCGGCAAAGATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTTATCT-TGAATTTT 127876 Query 41780 TGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGT 41838 |||| |||| | | ||||| || | ||| || || | || || |||||||| || Sbjct 127875 AGCTTTAACGTTTTCGATTGTGTCACTGGGCTCAACTTCGAGTGTAATTGTTTTACCAGT 127816 Query 41839 CAGCGTCTTTACGAAAATCTGCATG 41863 | || || ||||||||||||||| Sbjct 127815 TAAGGTTTTAACGAAAATCTGCATG 127791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462094998140400