Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq67 98.7 7e-16 >seq67 Length=335779 Score = 98.7 bits (108), Expect = 7e-16 Identities = 197/290 (68%), Gaps = 8/290 (3%) Strand=Plus/Plus Query 101805 GCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCAC 101864 || ||||||||| ||||| ||||||||||||||| ||||| || |||| ||||||| Sbjct 317712 GCTCTCCTAACC--ATATCTCCTGATCTTTGATACAACTGACACGAGAGCTCACCATCAC 317769 Query 101865 AGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924 ||||||||| || || |||| || || |||| |||| | ||| || || | Sbjct 317770 TGACATAAAACTGCACAAAGGCATGGCACGGGGGCAGAGCCATCTCAGGTATATCCACAG 317829 Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCA 101984 |||||| || |||||| || | | | | ||||| || ||||| || | || | Sbjct 317830 GATTCCATGCGGACATTATGATACGGCGACAAGACGGGTTGGTCTTTATCGTGTGTATGA 317889 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC---GCGCCCAACACCTTTATATT 102041 ||| |||||| || || |||| || | ||||| || ||| | |||| Sbjct 317890 CCTGAGCTAATTGATCTACACCTTGCCCATCGTAATCAAAATGCATGTCAC---TGTATT 317946 Query 102042 CTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 ||||| || || | ||| ||||| || || ||||| || ||||| ||| Sbjct 317947 GGGCTCCAAAGTGGCGCCATTGAAACCCGTAGACAGGACCTAGATCACCT 317996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361192211968898