Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq97 84.2 3e-11 >seq97 Length=262405 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 54778 tttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATC 54837 ||| |||||||||||||| || || || || || || | ||| || ||||| ||||| || Sbjct 89985 TTTCTTTGTTTCTTTGTGAAGGTTCGACACAGCAATACGAGCAGCAAGAATAGCATAGTC 89926 Query 54838 CGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGT 54897 ||||| | ||| || || ||| || | || |||| |||||||||| |||| || Sbjct 89925 AGGATGCTTTGTGGTCATAGAGGCGGCCGTCTCTGCTGCAAGAGTGTCCAGTTCTGAAGT 89866 Query 54898 TGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 || || ||| ||| | || | || |||||||| Sbjct 89865 AGTCACACCAGCATACACGCCATTAATGACCTTCAT 89830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593622166475040