Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_001659.2 Length=170101 Score E Sequences producing significant alignments: (Bits) Value seq1691 87.8 2e-12 >seq1691 Length=12360 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 113323 AGCATTTCAGAGGATTGTTCAGCCTCTACGGGCTTCGCGCTAAAGATCTCCTGGGGCCGC 113382 ||||| ||||| ||||||||||| || || ||||| || | ||| ||||| ||| || Sbjct 4730 AGCATCTCAGAAGATTGTTCAGCTTCAACAGGCTTTGCACCAAAAATCTCAGCGGGGCGA 4671 Query 113383 ACAATTCCCGACTTGTTGGTTCCCCCGGCCACGGACCGGTGGTGGGAGTCCAGCATATAT 113442 | ||| || || || || || || || | || || || || || || |||| ||||||| Sbjct 4670 ATAATACCAGATTTATTAGTACCACCACCAACAGAACGATGATGAGAATCCAACATATAT 4611 Query 113443 TGCGTCAAGGGTTCTGATACGGACTGCGCCGCCAGGATTCC 113483 || || | ||||| || || | ||| || || || || || Sbjct 4610 TGAGTAAGAGGTTCAGAGACAGCCTGAGCAGCAAGAATCCC 4570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544104060908880