Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq67 102 6e-17 >seq67 Length=335779 Score = 102 bits (112), Expect = 6e-17 Identities = 191/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 97181 CCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACT 97240 ||||||| ||||||||||||| |||||||| || |||| ||||||| |||||||||| Sbjct 317722 CCATATCTCCTGATCTTTGATACAACTGACACGAGAGCTCACCATCACTGACATAAAACT 317781 Query 97241 GACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCAC 97300 | || |||| || ||||||| ||||| | || | ||| | |||||| || Sbjct 317782 GCACAAAGGCATGGCACGGGGGCAGAGCCATCTCAGGTATATCCACAGGATTCCATGCGG 317841 Query 97301 ACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATT 97360 |||| | || | | | | ||||| || | ||| || | || | ||| ||||| Sbjct 317842 ACATTATGATACGGCGACAAGACGGGTTGGTCTTTATCGTGTGTATGACCTGAGCTAATT 317901 Query 97361 GATCAACGCCTTCTCCACCATAAT---TGTGCTTAAGACCTTGATATTCTGCTCCAAAAT 97417 |||| || |||| ||| | |||| ||| | | | || |||| |||||||| | Sbjct 317902 GATCTACACCTTGCCCATCGTAATCAAAATGC--ATGTCACTG-TATTGGGCTCCAAAGT 317958 Query 97418 GCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 | | |||||| || || || ||||| || || || ||| Sbjct 317959 GGCGCCATTGAAACCCGTAGACAGGACCTAGATCACCT 317996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346727374290860