Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2029 89.7 9e-13 >seq2029 Length=9855 Score = 89.7 bits (98), Expect = 9e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 189482 GAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACT 189541 |||||||| |||||| ||||| | | ||||||||||||||||||||||| |||||||| Sbjct 7014 GAAGGAAAGATGCATGGTTTTCTGAGGATGTATTGGGCTAAGAAGATACTGGAATGGACA 7073 Query 189542 AGAACACCTGAAGACGCTTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGAC 189601 || ||||| || | || || | ||||||| | || | ||||| || | || Sbjct 7074 TCAAGTCCTGAGGAAGGATTAAGGATTGCTATCTATCTCAATGATAAGTATGAGATTGAT 7133 Query 189602 GGCACGGATCCTAACGGATACGTAGGT 189628 || | || ||||| ||||| || ||| Sbjct 7134 GGTAGAGACCCTAATGGATATGTTGGT 7160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923042187615920