Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq10007 96.9 3e-15 seq97 93.3 4e-14 seq576 89.7 5e-13 >seq10007 Length=1404 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 37137 AACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAAT 37196 ||||||||| |||||||| | ||| | ||| | |||||||||||||| ||||| ||||| Sbjct 563 AACCTGAAACTCTCCAGAGAGTACACGTCTGGAGTATATATTGCTAGTGTATGGCTCAAT 504 Query 37197 GGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAG 37256 ||||||||| || | | ||| || | ||| || || || ||||| || |||| || || Sbjct 503 GGACTCATTGTTGCCAAGTATCTGTGCTGTGGAGGCTGTTGGCATAGGAGCTACAAGGAG 444 Query 37257 GCTATT 37262 || || Sbjct 443 ACTGTT 438 >seq97 Length=262405 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 37137 AACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAAT 37196 ||||||||| |||||||| | ||| | ||| | |||||||||||||| || || ||||| Sbjct 112944 AACCTGAAACTCTCCAGAGAGTACACGTCTGGAGTATATATTGCTAGTGTACGGCTCAAT 112885 Query 37197 GGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAG 37256 ||||||||| || | | ||| || | ||| || || || ||||| || |||| || || Sbjct 112884 GGACTCATTGTTGCCAAGTATCTGTGCTGTGGAGGCTGTTGGCATAGGAGCTACAAGGAG 112825 Query 37257 GCTATT 37262 || || Sbjct 112824 ACTGTT 112819 >seq576 Length=57293 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/144 (75%), Gaps = 5/144 (3%) Strand=Plus/Minus Query 11705 CGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCT 11764 ||||| || | ||| ||||| || ||||| || || || |||||||||||||| |||||| Sbjct 19094 CGTTTCTTGAGCCAGAATATTGCTGCAAAAGAGCCGGAGAAGAATATTCCCTCAACAGCT 19035 Query 11765 GCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCT-AGA---TATCCATTTTCTGGC 11820 ||||| || | ||||| || ||| | | | | || ||| ||||| || |||| Sbjct 19034 GCAAAAGCAATGACTCTCTCGCCA-AAAGAATCATCCTCAGACTGAATCCAATTGATGGC 18976 Query 11821 CCAATCAGCTTTCTTTTTTACGCA 11844 ||||||||||||||| || || || Sbjct 18975 CCAATCAGCTTTCTTCTTAACACA 18952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468446333809120