Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq97 84.2 3e-11 >seq97 Length=262405 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 66809 tttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATC 66868 ||| |||||||||||||| || || || || || || | ||| || | ||| ||||| || Sbjct 89985 TTTCTTTGTTTCTTTGTGAAGGTTCGACACAGCAATACGAGCAGCAAGAATAGCATAGTC 89926 Query 66869 CGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGT 66928 ||||| | ||| || || ||| || | || ||||| |||||||||| |||| || Sbjct 89925 AGGATGCTTTGTGGTCATAGAGGCGGCCGTCTCTGCTGCAAGAGTGTCCAGTTCTGAAGT 89866 Query 66929 TGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 || || ||| ||| | || | || |||||||| Sbjct 89865 AGTCACACCAGCATACACGCCATTAATGACCTTCAT 89830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658062572510320