Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_004687.1 Length=156102 Score E Sequences producing significant alignments: (Bits) Value seq3137 91.5 1e-13 >seq3137 Length=6657 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 116616 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 116675 |||||||| || ||||||| || |||||||||||| |||||| | ||||||| | ||| Sbjct 1416 GGCCCGGGGCGGGGCTCCGGCGTCGGCTCGCTGGTCGCCTACGCCTTGGGCAT--CGTCG 1359 Query 116676 A--TCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCCG 116733 | |||| || | | |||||| || | ||||| ||||| ||||| | || ||| | Sbjct 1358 ATCTCGATCCCTTGTACTACGACTTGCTCTTCGAACGCTTCCTCAACACCGAGCGCATCT 1299 Query 116734 ACTTCCCCGACATCGACGTCGACTTC 116759 ||| ||||| |||| ||||| ||| Sbjct 1298 CCTTGCCCGATTTCGATGTCGATTTC 1273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499314763252960