Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq209 89.7 3e-13 >seq209 Length=164050 Score = 89.7 bits (98), Expect = 3e-13 Identities = 73/87 (84%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| |||| ||| ||||| ||| |||||| ||||||||||||||| ||||||| Sbjct 30694 AAAAAA--AAATGTGGTCCATGTGAGGCTCGAACTCACGACCTTCGCGTTATCAGCACGA 30637 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||| || Sbjct 30636 CGCTCTAGCCAACTGAGCTAATGGACC 30610 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261448501592248