Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq89 89.7 5e-13 >seq89 Length=276290 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||||||||| | ||||| ||| | || || | ||| | ||| | Sbjct 106152 ATGCAAATATTTGTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTCT 106211 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || ||| | | ||| |||||| || |||||||| || || || |||||| Sbjct 106212 GATACTATGGAGAATATTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAA 106271 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||||||| | | || | |||| | ||||||| | | | || || |||||| Sbjct 106272 CAGAGACTCATATTTGCTGGTAGACAATTGGAAGATGGTCGTACACTCTCAGATTATAAC 106331 Query 26949 ATTCAAAAAGAA 26960 |||||||||||| Sbjct 106332 ATTCAAAAAGAA 106343 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||||||||| | ||||| ||| | || || | ||| | ||| | Sbjct 106380 ATGCAAATATTTGTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTCT 106439 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || ||| | || ||| |||||| || |||||||| || || || |||||| Sbjct 106440 GATACTATTGAGAATGTTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAA 106499 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||||||| | | || ||| | | ||||||| | | | || || |||||| Sbjct 106500 CAGAGACTCATATTTGCTGGTAAAATATTGGAAGATGGTCGTACACTCTCAGATTATAAC 106559 Query 26949 ATTCAAAAAGAA 26960 |||||||| ||| Sbjct 106560 ATTCAAAAGGAA 106571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478582236014560