Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq97 93.3 5e-14 >seq97 Length=262405 Score = 93.3 bits (102), Expect = 5e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 63820 tttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATC 63879 ||| |||||||||||||| || || || || || || | ||| || ||||| ||||| || Sbjct 89985 TTTCTTTGTTTCTTTGTGAAGGTTCGACACAGCAATACGAGCAGCAAGAATAGCATAGTC 89926 Query 63880 CGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGT 63939 ||||| | ||| || || ||| || | || ||||| |||||||||| |||| || Sbjct 89925 AGGATGCTTTGTGGTCATAGAGGCGGCCGTCTCTGCTGCAAGAGTGTCCAGTTCTGAAGT 89866 Query 63940 TGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 || |||||| ||| | || | || |||||||| Sbjct 89865 AGTCACACCAGCATACACGCCATTAATGACCTTCAT 89830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633525882480800