Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq78 122 7e-23 seq89 118 9e-22 seq85 95.1 1e-14 >seq78 Length=312069 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | ||||| |||||||| ||||||||||| || ||| || |||||| Sbjct 172469 AACAAGATGAAGTGTAGACTCTTTTTGGATGTTGTAATCAGACAAAGTGCGGCCATCTTC 172410 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 ||| || || ||||| |||| |||||||| || || || ||||| ||||| ||||| Sbjct 172409 AAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCGGGTGGAATTCCTTCCTTGTCTTG 172350 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 |||||| ||||| | ||||| ||| |||| | || || || | || | || || Sbjct 172349 AATCTTGGCTTTTACGTTTTCAATGGTATCGGAAGGCTCAACTTCAAGAGTAATGGTCTT 172290 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||| ||| || ||||| || ||||| Sbjct 172289 TCCGGTCAAAGTCTTGACAAAGATTTGCAT 172260 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | |||||||| ||||| |||||||||||| | |||||| |||||| Sbjct 172697 AACAAGATGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTACGGCCATCTTC 172638 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | || || || || |||| |||||||| || || || || || ||||||||||| Sbjct 172637 CAACTGCTTTCCGGCAAAGATAAGACGCTGCTGATCGGGTGGGATTCCTTCTTTGTCTTG 172578 Query 114293 AATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351 || ||| | |||| | | ||||| ||||| | | || || || | || | || | Sbjct 172577 GAT-TTTAGCTTTAACATTTTCAATAGTGTCAGAAGGCTCAACTTCAAGAGTGATGGTCT 172519 Query 114352 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || ||||| ||||||||||| Sbjct 172518 TTCCGGTAAGTGTCTTTACGAAAATCTGCAT 172488 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | ||||| || || ||||||||||| ||| | |||||| |||||| Sbjct 172013 AACAAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCTTC 171954 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||| || |||||| |||| |||||||| ||||| || || || ||||| ||||| Sbjct 171953 AAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTG 171894 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | || | ||||| | | || || || | ||| | || || Sbjct 171893 GATCTTGGCCTTGACGTTCTCGATTGTGTCAGAAGGCTCAACTTCAAGGGTGATGGTCTT 171834 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || ||||| || || || ||||| Sbjct 171833 TCCGGTAAGTGTTTTCACGAAGATTTGCAT 171804 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | ||||| || |||||||||||||| || || |||||| |||||| Sbjct 172925 AACAAGATGAAGTGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCTTC 172866 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | || || ||||| |||| ||||||||||| || || || || ||||| ||||| Sbjct 172865 CAACTGCTTTCCAGCAAAGATAAGACGCTGTTGATCAGGTGGGATTCCTTCCTTGTCCTG 172806 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | |||| ||| || | | || || || | || | || || Sbjct 172805 GATCTTAGCCTTGACATTCTCAATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTCTT 172746 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || ||||| ||||||||||| Sbjct 172745 TCCGGTAAGTGTCTTTACGAAAATCTGCAT 172716 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | || |||||||| || ||||||||||| || ||| || |||||| Sbjct 172241 AACAAGATGGAGTGTGGATTCTTTCTGGATGTTGTAATCAGACAAAGTGCGGCCATCTTC 172182 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 ||| || || || || |||| |||||||| ||||| || || || ||||| ||||| Sbjct 172181 AAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCGGGTGGGATTCCTTCCTTGTCCTG 172122 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | |||| ||||| | | || || || | || | || || Sbjct 172121 GATCTTAGCCTTGACGTTCTCAATAGTGTCAGAAGGCTCAACTTCAAGAGTGATGGTCTT 172062 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || || || || || ||||| Sbjct 172061 TCCGGTAAGTGTCTTCACGAAGATTTGCAT 172032 >seq89 Length=276290 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 |||||||| | |||| ||||||||||||||| ||||| | |||||| |||||| Sbjct 106360 ACTAAATGCAACGTACTTTCTTTTTGAATGTTATAATCTGAGAGTGTACGACCATCTTCC 106301 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 | |||| ||||||| | ||||| | |||||| || || || || |||||||| || Sbjct 106300 AATTGTCTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGT 106241 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 |||||| ||| | | || | || || | | ||| || || | || | ||||| Sbjct 106240 ATCTTTGCTTTAATATTCTCCATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTTTA 106181 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || ||||||||||||||||| || |||||| Sbjct 106180 CCAGTCAGAGTTTTTACAAATATTTGCATG 106151 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 |||||||||| ||| ||| ||||||||||| ||||| | |||||| |||||| Sbjct 106588 ACTAAATGTAATGTACTTTCCTTTTGAATGTTATAATCTGAGAGTGTACGACCATCTTCC 106529 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 | | ||||||||| | ||||| | |||||| || || || || |||||||| || Sbjct 106528 AATATTTTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGT 106469 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 |||||| ||| | | |||| || || | | ||| || || | || | ||||| Sbjct 106468 ATCTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTTTA 106409 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || ||||||||||||||||| || |||||| Sbjct 106408 CCAGTCAGAGTTTTTACAAATATTTGCATG 106379 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114176 TAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAG 114235 ||||| ||| ||| | | ||| |||||| ||||| | |||||| |||| | | Sbjct 108011 TAAATCTATTGTATCCTTTGTTTTAATGTTATAATCTGAGAGTGTACGATCATCTACCAA 107952 Query 114236 TTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAAT 114295 | ||||||||| | ||||| | |||||| || || || || |||||||| || || Sbjct 107951 TACTTTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGTAT 107892 Query 114296 CTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCC 114355 |||| ||| | | |||| || || | | ||| || || | || | ||| | || Sbjct 107891 CTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTCTACC 107832 Query 114356 GGTCAGAGTTTTTACAAAAATCTGCATG 114383 ||||||||||||||||| || |||||| Sbjct 107831 AGTCAGAGTTTTTACAAATATTTGCATG 107804 >seq85 Length=280044 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| || ||||| ||||| | || ||| ||| || | ||||||||||| ||| Sbjct 114614 CTTTCTGGATGTTATAATCAGAGAGGGTTCGACCATCCTCCAACTGTTTACCAGCAAAGA 114555 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 |||| ||||| ||||| ||||| |||||||| ||||| ||||| |||| | || Sbjct 114554 TGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTT 114495 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 | | ||| || | | ||||| || | || | || || || || ||||| || |||| Sbjct 114494 CTATGGTATCAGAAGGCTCGACCTCTAGCGTGATGGTCTTCCCAGTGAGAGTCTTGACAA 114435 Query 114373 AAATCTGCAT 114382 |||||||||| Sbjct 114434 AAATCTGCAT 114425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420065797041576