Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq89 149 1e-30 seq78 147 5e-30 seq85 127 5e-24 seq431 118 3e-21 >seq89 Length=276290 Score = 149 bits (164), Expect = 1e-30 Identities = 173/232 (75%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || | | |||||| | ||| | ||| ||||||||||| || ||||| | Sbjct 106382 CATG-CCACCTCGACGACGAAGTACTAAATGCAACGTACTTTCTTTTTGAATGTTATAAT 106324 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | ||| || || || ||||| |||||| | || || || || || | ||||||| | Sbjct 106323 CTGAGAGTGTACGACCATCTTCCAATTGTCTACCAGCAAATATGAGTCTCTGTTGATCAG 106264 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||||||||||||||||||| || || ||||| | || || |||| ||| | || Sbjct 106263 GTGGGATTCCTTCTTTATCCTGTATCTTTGCTTTAATATTCTCCATAGTATCAGAAGGTT 106204 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| || || || || || || |||||||| || || ||||| ||||| Sbjct 106203 CAACTTCAAGAGTAATTGTTTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106152 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| | ||| | || ||||| ||||| || ||||| || | ||| || || || || Sbjct 106592 AAGTACTAAATGTAATGTACTTTCCTTTTGAATGTTATAATCTGAGAGTGTACGACCATC 106533 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 ||| ||| ||| || || || || || | ||||||| | |||||||||||||||||| Sbjct 106532 TTCCAATATTTTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATC 106473 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||| || || ||||| || || || |||| ||| | ||| ||||| || || || || Sbjct 106472 CTGTATCTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGT 106413 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||| || || ||||| ||||| Sbjct 106412 TTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106380 Score = 114 bits (126), Expect = 3e-20 Identities = 140/190 (74%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | || | |||||| | ||| | || ||||| ||||| || ||||| | Sbjct 106154 CATG-CCACCTCTAAGACGAAGTACTAAATGTAAAGTACTTTCATTTTGAATGTTATAAT 106096 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | ||| || || || | ||| |||||||| || | || ||||| | ||||||| | Sbjct 106095 CTGAGAGTGTACGACCATTTTCCAATTGTTTACCAACAAATATCAGTCTCTGTTGATCAG 106036 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||||||||||||| ||||| |||||| ||||||| |||| | | ||| || | | Sbjct 106035 GTGGGATTCCTTCTTTGTCCTGTATTTTCTCTTTCACACTTTCAACGGTATCACTAGCCT 105976 Query 288422 CTACTTCGAG 288431 | ||||| || Sbjct 105975 CAACTTCAAG 105966 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 288280 CTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCG 288339 |||| |||| || ||||| || | ||| || || | ||| | ||| ||| || || Sbjct 107996 CTTTGTTTTA--ATGTTATAATCTGAGAGTGTACGATCATCTACCAATACTTTACCAGCA 107939 Query 288340 AAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || || | ||||||| | ||||||||||||||||||||| || || ||||| || Sbjct 107938 AATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGTATCTTTGCTTTAACA 107879 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| ||| | ||| ||||| || || || || | || |||||||| || Sbjct 107878 TTCTCAATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTCTACCAGTCAGAGTTTTT 107819 Query 288460 ACGAATATCTGCAT 288473 || ||||| ||||| Sbjct 107818 ACAAATATTTGCAT 107805 >seq78 Length=312069 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || | ||| | || || ||||| | || ||| |||||||| || || |||| Sbjct 172715 TCCTCCCCTGAGGCGGAGAACAAGATGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGA 172656 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| || || ||||| || ||||| |||||||| ||| ||| Sbjct 172655 AAGAGTACGGCCATCTTCCAACTGCTTTCCGGCAAAGATAAGACGCTGCTGATCGGGTGG 172596 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||||||| || |||||||| ||||| || ||||| |||| || | || || Sbjct 172595 GATTCCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGCTCAAC 172536 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| ||||| ||||| || ||||| ||||| ||||||||| Sbjct 172535 TTCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172487 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| || || ||||| || || ||||| | | || || || ||| Sbjct 172927 AGAACAAGATGAAGTGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCT 172868 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || || || ||||| || ||||| |||||||||||| | |||||||||||| || ||| Sbjct 172867 TCCAACTGCTTTCCAGCAAAGATAAGACGCTGTTGATCAGGTGGGATTCCTTCCTTGTCC 172808 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || || || || || || | ||| | || ||||| || ||||| ||| Sbjct 172807 TGGATCTTAGCCTTGACATTCTCAATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTC 172748 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| || ||||| ||||| ||||||||| Sbjct 172747 TTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172715 Score = 125 bits (138), Expect = 2e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || | ||| | || || ||||| | ||| |||||| ||||| || || || | Sbjct 172259 TCCTCCTCTGAGGCGGAGAACAAGATGGAGTGTGGATTCTTTCTGGATGTTGTAATCAGA 172200 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| || ||||| | || ||||| || ||||| |||||||| || ||| Sbjct 172199 CAAAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCGGGTGG 172140 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||| || |||||||| || || || ||||| || |||| || | || || Sbjct 172139 GATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCAATAGTGTCAGAAGGCTCAAC 172080 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| ||||| ||||| || ||||| ||||| || |||||| Sbjct 172079 TTCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTCACGAAGATTTGCATT 172031 Score = 125 bits (138), Expect = 2e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || | ||| | || || ||||||| || ||||||||||| || || || | Sbjct 172487 TCCTCCCCTGAGGCGGAGAACAAGATGAAGTGTAGACTCTTTTTGGATGTTGTAATCAGA 172428 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| || ||||| | || || || || ||||| |||||||| ||| ||| Sbjct 172427 CAAAGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCGGGTGG 172368 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| || || || || || ||||| |||||||| || | |||| | || || Sbjct 172367 AATTCCTTCCTTGTCTTGAATCTTGGCTTTTACGTTTTCAATGGTATCGGAAGGCTCAAC 172308 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || || ||||| ||||||| ||||||||| || || |||||| Sbjct 172307 TTCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATT 172259 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || | ||| | || || ||||||| || || || || || || ||||||| Sbjct 172031 TCCTCCCCTGAGGCGGAGAACAAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGA 171972 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | ||| || || |||||||| |||||||| || | ||| Sbjct 171971 AAGAGTACGGCCATCTTCAAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGTGG 171912 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||| || || ||||| || || || ||||| || || | || | || || Sbjct 171911 GATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATTGTGTCAGAAGGCTCAAC 171852 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||| ||||| ||||| || || || ||||| || ||||| Sbjct 171851 TTCAAGGGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATTTGCAT 171804 >seq85 Length=280044 Score = 127 bits (140), Expect = 5e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| ||||| ||||| || | ||| || || || || || || ||||| || || |||| Sbjct 114614 CTTTCTGGATGTTATAATCAGAGAGGGTTCGACCATCCTCCAACTGTTTACCAGCAAAGA 114555 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | || ||||| || | ||||| ||||| || |||||||| || || || || |||| Sbjct 114554 TGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTT 114495 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 |||| | ||| | || || || |||||||| |||||||| || ||||||||||| | Sbjct 114494 CTATGGTATCAGAAGGCTCGACCTCTAGCGTGATGGTCTTCCCAGTGAGAGTCTTGACAA 114435 Query 288464 ATATCTGCAT 288473 | |||||||| Sbjct 114434 AAATCTGCAT 114425 >seq431 Length=85469 Score = 118 bits (130), Expect = 3e-21 Identities = 145/197 (74%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 288274 ATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTT 288333 || || ||| | |||| || ||||| || | ||| |||| || |||||||||||||| Sbjct 84438 ATTGTACTTCCAATTTGAATGTTATAATCTGAGAGTGTGCAACCATCTTCTAATTGTTTA 84379 Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 || || || || || | ||||||| | |||||||||| ||| |||||| || || ||| Sbjct 84378 CCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTACTTCATCCTGTATCTTTGCT 84319 Query 288394 TTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || ||||| |||| ||| ||| | ||| ||||| || || || | || || ||| Sbjct 84318 TTAACATTTTCAATAGTATCAGAGCTAGGTTCAACTTCAAGAGTAATTCTTTTACCAGTC 84259 Query 288451 AGAGTCTTGACGAATAT 288467 |||| |||| ||||| Sbjct 84258 AGAG---TGACAAATAT 84245 Score = 107 bits (118), Expect = 5e-18 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| | ||| || |||||||| |||| |||||||| || | ||| || | || || Sbjct 84217 AAGTACTAAATGTATTGTGCTTTCCGTTTGAATATTATAATCTGAGAGTGTACAACCATC 84158 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTT--TA 288378 ||| |||||| | || || | || || | ||||||| | |||||||||||||| || Sbjct 84157 TTCCAATTGTCTACCAGCATATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTCATA 84098 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 ||||| || |||| || || || |||| ||| ||| | ||||| || || || Sbjct 84097 TCCTGTATAGCTCCTTTAACATTCTCAATAGTATCAGAAGATACAACTTCAAGAGTAATT 84038 Query 288439 GTCTTCCCGGTCAGAGTCTTGAC 288461 || || || |||||||| || || Sbjct 84037 GTTTTACCAGTCAGAGTTTTCAC 84015 Score = 104 bits (114), Expect = 6e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||||| | ||| || | |||| || || ||||| || | | Sbjct 81249 CCACCTCGAAGACGGAGTACTAAATGCATTATATTTTCCATTGAAATTTTATAATCTGAG 81190 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || | ||||| ||| ||| || || || | || | ||||||| | |||| Sbjct 81189 AGTGTACGACTATCTTCCAATACTTTACCAGCAAATAAAAGCCTCTGTTGATCAGGTGGG 81130 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||||||||| || |||||||| || || || |||| ||| | ||| ||| Sbjct 81129 ATTCCTTCTTTATCCTGTATCTTCGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACT 81070 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 | || || |||| || ||||||||||| || Sbjct 81069 CCAAGAGTAATCGCTTTACCGGTCAGAGTTTT 81038 Score = 102 bits (112), Expect = 2e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 288270 ATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTG 288329 ||| || || ||||| ||||| |||||||| || | ||| || | || ||||||||||| Sbjct 84676 ATGTATTGTACTTTCCTTTTGAATATTATAATCTGAGAGTGTACAACCATCTTCTAATTG 84617 Query 288330 TTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTT 288389 ||| || || || | || | ||||||| | || ||||||| ||| |||||| || || Sbjct 84616 TTTACCAGCAAATACAAGCCTCTGTTGATCAGATGAGATTCCTACTTCATCCTGTATCTT 84557 Query 288390 CGCTTTCACGTTTTCTATAGAATC 288413 ||||| || ||||| |||| ||| Sbjct 84556 TGCTTTAACATTTTCAATAGTATC 84533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179451898313844