Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq78 145 8e-30 seq89 118 1e-21 seq85 98.7 1e-15 seq45 87.8 2e-12 >seq78 Length=312069 Score = 145 bits (160), Expect = 8e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || |||||||| ||||||||||| | | ||||| | ||| Sbjct 172471 AGAACAAGATGAAGTGTAGACTCTTTTTGGATGTTGTAATCAGACAAAGTGCGGCCATCT 172412 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||||||||| ||| | || || |||||||| ||||| ||||||||||| || ||| Sbjct 172411 TCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCGGGTGGAATTCCTTCCTTGTCT 172352 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||||| || | ||||| | || ||||| | ||| | |||| Sbjct 172351 TGAATCTTGGCTTTTACGTTTTCAATGGTATCGGAAGGCTCAACTTCAAGAGTAATGGTC 172292 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||||||||| || || || ||||||||| Sbjct 172291 TTTCCGGTCAAAGTCTTGACAAAGATTTGCATT 172259 Score = 132 bits (146), Expect = 5e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || |||||||| || ||||||||||| | | ||||| | ||| Sbjct 172243 AGAACAAGATGGAGTGTGGATTCTTTCTGGATGTTGTAATCAGACAAAGTGCGGCCATCT 172184 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| |||||| | || || |||||||||||||| || |||||||| || || Sbjct 172183 TCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCGGGTGGGATTCCTTCCTTGTCC 172124 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | || ||| | || ||||| | ||| | |||| Sbjct 172123 TGGATCTTAGCCTTGACGTTCTCAATAGTGTCAGAAGGCTCAACTTCAAGAGTGATGGTC 172064 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||| | || || ||||| ||||||||| Sbjct 172063 TTTCCGGTAAGTGTCTTCACGAAGATTTGCATT 172031 Score = 131 bits (144), Expect = 2e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| ||||| ||||||||||| | | || || | ||| Sbjct 172699 AGAACAAGATGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTACGGCCATCT 172640 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| |||||| | || || |||||||| ||||| || ||||||||||| ||| Sbjct 172639 TCCAACTGCTTTCCGGCAAAGATAAGACGCTGCTGATCGGGTGGGATTCCTTCTTTGTCT 172580 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| ||| || | || ||| | || ||||| | ||| | ||| Sbjct 172579 TGGA-TTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGCTCAACTTCAAGAGTGATGGT 172521 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| ||||| | || ||||||||||| |||||| Sbjct 172520 CTTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172487 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || || || ||||||||||| || | | || || | ||| Sbjct 172015 AGAACAAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCATCT 171956 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| |||||||| || | || || ||||||||||| || || |||||||| || ||| Sbjct 171955 TCAAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGTGGGATTCCTTCCTTGTCT 171896 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | ||| ||| | || ||||| | || | |||| Sbjct 171895 TGGATCTTGGCCTTGACGTTCTCGATTGTGTCAGAAGGCTCAACTTCAAGGGTGATGGTC 171836 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || ||||| | ||||| ||||| |||||||| || Sbjct 171835 TTTCCGGTAAGTGTTTTCACGAAGATTTGCATCTT 171801 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || || |||||||||||||| || | | || || | ||| Sbjct 172927 AGAACAAGATGAAGTGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCT 172868 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| || ||| | || || ||||| || || || || |||||||| || || Sbjct 172867 TCCAACTGCTTTCCAGCAAAGATAAGACGCTGTTGATCAGGTGGGATTCCTTCCTTGTCC 172808 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | |||||| | || ||||| | ||| | |||| Sbjct 172807 TGGATCTTAGCCTTGACATTCTCAATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTC 172748 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||| | || ||||||||||| |||||| Sbjct 172747 TTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172715 >seq89 Length=276290 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||| | ||| ||||||||||||||| ||||||| || || || | || Sbjct 106364 AAGTACTAAATGCAACGTACTTTCTTTTTGAATGTTATAATCTGAGAGTGTACGACCATC 106305 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | || | || ||| | ||||| | ||| || || || || ||||||||||| || Sbjct 106304 TTCCAATTGTCTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATC 106245 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 |||| | |||||||| | | ||||| |||||| | || ||||| | ||| | | Sbjct 106244 CTGTA-TCTTTGCTTTAATATTCTCCATAGTATCAGAAGGTTCAACTTCAAGAGTAATTG 106186 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || || |||| ||||||||| || |||||||| Sbjct 106185 TTTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106152 Score = 105 bits (116), Expect = 7e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 64223 CGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTG 64282 || || | ||| |||| ||| | || ||| ||||||||||| ||||||| || || Sbjct 106600 CGAAAACAAAGTACTAAATGTAATGTACTTTCCTTTTGAATGTTATAATCTGAGAGTGTA 106541 Query 64283 CGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 || | ||||| | || || ||| | ||||| | ||| || || || || |||||| Sbjct 106540 CGACCATCTTCCAATATTTTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCT 106481 Query 64343 TCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTAC 64401 ||||| || |||| | |||||||| ||| ||| | |||||| | || ||||| | Sbjct 106480 TCTTTATCCTGTA-TCTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACTTCAAG 106422 Query 64402 AGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || || || |||| ||||||||| || |||||||| Sbjct 106421 AGTAATTGTTTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106380 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 64257 TTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGA 64316 ||| |||||| ||||||| || || || | ||| | | || || ||| | |||| Sbjct 107991 TTTTAATGTTATAATCTGAGAGTGTACGATCATCTACCAATACTTTACCAGCAAATATGA 107932 Query 64317 GCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCC 64375 | | ||| || || || || ||||||||||| || |||| | |||||||| ||| ||| Sbjct 107931 GTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGTA-TCTTTGCTTTAACATTCTCA 107873 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | |||||| | || ||||| | ||| | || | || |||| ||||||||| || Sbjct 107872 ATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTCTACCAGTCAGAGTTTTTACAAAT 107813 Query 64436 ATTTGCAT 64443 |||||||| Sbjct 107812 ATTTGCAT 107805 >seq85 Length=280044 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || ||||| ||||| | || ||| || | || || | ||| || || ||| | | Sbjct 114614 CTTTCTGGATGTTATAATCAGAGAGGGTTCGACCATCCTCCAACTGTTTACCAGCAAAGA 114555 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 |||| ||||||||||| ||||| || ||||| || || || || || ||||||| | Sbjct 114554 TGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTT 114495 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | |||||| | || || |||| || | |||||| || || | ||| || || | Sbjct 114494 CTATGGTATCAGAAGGCTCGACCTCTAGCGTGATGGTCTTCCCAGTGAGAGTCTTGACAA 114435 Query 64434 AAATTTGCAT-TTTAA 64448 |||| ||||| ||||| Sbjct 114434 AAATCTGCATCTTTAA 114419 >seq45 Length=404445 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| | |||||| || || ||||||| ||| || || || || |||||||| || | | Sbjct 20291 CCGCCTCTCAATCTGAGGACAAGATGAAGCGTGGACTCCTTCTGTATGTTGTAGTCAGAG 20350 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | |||||||||||||| || ||| | || | || |||||| || || || Sbjct 20351 AGAGTGCGGCCATCTTCAAGCTGCTTCCCAGCAAATATCAACCTCTGCTGATCAGGTGGG 20410 Query 64337 ATTCCT 64342 || ||| Sbjct 20411 ATGCCT 20416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499561121987120