Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq930 89.7 1e-13 >seq930 Length=26019 Score = 89.7 bits (98), Expect = 1e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 8441 TGATTATCGTCGGCGGACGGCCGTCGATGGGAAAGACCTCCCTCGCAATGAATATCGCAG 8500 |||| ||||||| ||| |||||||||||||| ||||||||| | || |||||||| | | Sbjct 3884 TGATCATCGTCGCCGGTCGGCCGTCGATGGGCAAGACCTCCTTTGCGATGAATATGGTGG 3825 Query 8501 AGCATGTCGCCATC-GTGTCGAGATTGCCCGTCGGCGTCTTGTCGCTGGAAATGCCGACC 8559 || | | |||||| | |||| | | |||| || || |||||||||| || Sbjct 3824 AGGAGGCGGCCATCAAAGGGGAGA-TCACGGTCGCGGTTTTCAGCATGGAAATGCCCGCC 3766 Query 8560 GAACAGTTGACCATGCGCATGCTGGCGTCGACATCCCGTATCAGCCAAAACAGGCTGCGA 8619 || || | |||||||| ||||| | ||| | ||| || | | | | || Sbjct 3765 GAGCAACTCACCATGCGGATGCTCTCCTCGCTGGGAAGGATCGATCAGCAAAAGGTACGC 3706 Query 8620 ACCGGTCGCCTCGAGGATGACGACTGGCCGCGCCTGAC 8657 |||||||| ||||| || ||||||||||| ||||| Sbjct 3705 ACCGGTCGTCTCGACAGCGATGACTGGCCGCGGCTGAC 3668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127525307335608