Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq89 127 8e-24 seq78 120 1e-21 seq431 105 3e-17 seq50 102 3e-16 seq460 96.9 1e-14 >seq89 Length=276290 Score = 127 bits (140), Expect = 8e-24 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112 ||||||| || ||||| |||||||||||||| ||||||||||| |||||| | |||||| Sbjct 106385 AATATTT--GTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTCTGAT 106442 Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172 | ||||| | ||||| ||| || || ||||| |||||||| || ||||||||||| Sbjct 106443 ACTATTGAGAATGTTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAACAG 106502 Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232 | | || || | || ||| | | |||||||| | || | | |||||||| ||| Sbjct 106503 AGACTCATATTTGCTGGTAAAATATTGGAAGATGGTCGTACACTCTCAGATTATAACATT 106562 Query 391233 GATAAGGATGCAACACTTCACTTAGTA 391259 | ||||| ||| | || |||||| Sbjct 106563 CAAAAGGAAAGTACATTACATTTAGTA 106589 Score = 125 bits (138), Expect = 3e-23 Identities = 141/188 (75%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112 ||||||| || ||||| |||||||||||||| ||||||||||| |||||| | |||||| Sbjct 106157 AATATTT--GTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTCTGAT 106214 Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172 | || || ||||||| ||| || || ||||| |||||||| || ||||||||||| Sbjct 106215 ACTATGGAGAATATTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAACAG 106274 Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232 | | || || | || | |||| | |||||||| | || | | |||||||| ||| Sbjct 106275 AGACTCATATTTGCTGGTAGACAATTGGAAGATGGTCGTACACTCTCAGATTATAACATT 106334 Query 391233 GATAAGGA 391240 | || || Sbjct 106335 CAAAAAGA 106342 Score = 109 bits (120), Expect = 2e-18 Identities = 96/119 (81%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112 ||||||| || ||||| |||||||||| ||| ||||||||||| |||||| | |||||| Sbjct 107810 AATATTT--GTAAAAACTCTGACTGGTAGAACAATTACTCTTGAAGTTGAACCTTCTGAT 107867 Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACA 391171 | ||||| | ||||| ||| || || ||||| |||||||| || ||||||||||| Sbjct 107868 ACTATTGAGAATGTTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAACA 107926 >seq78 Length=312069 Score = 120 bits (132), Expect = 1e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||| || || || ||||||||||| ||||| | || Sbjct 172259 AATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTTGAAGTTGAGCCTTC 172318 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||||| | ||| || |||||||| |||||||||||||| || ||||| Sbjct 172319 CGATACCATTGAAAACGTAAAAGCCAAGATTCAAGACAAGGAAGGAATTCCACCCGATCA 172378 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || || | || || || ||||||||||| | |||||| | ||||| || Sbjct 172379 GCAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACTTTGTCTGATTACAA 172438 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 || | || || | |||||||| Sbjct 172439 CATCCAAAAAGAGTCTACACTTCA 172462 Score = 120 bits (132), Expect = 1e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || ||||| || || || || || |||||||| ||||| | || Sbjct 172715 AATGCAGATTTTCGTAAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTC 172774 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || || || || || ||||||||||| || |||||||| Sbjct 172775 TGATACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCACCTGATCA 172834 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | || || | || || || | |||||||| | |||||| | || || || Sbjct 172835 ACAGCGTCTTATCTTTGCTGGAAAGCAGTTGGAAGATGGCCGTACTTTGTCTGACTACAA 172894 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | |||||||| Sbjct 172895 CATTCAAAAGGAGTCTACACTTCA 172918 Score = 102 bits (112), Expect = 3e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 ||| | || ||||| ||| ||| ||||| |||| || || |||| || ||||||| Sbjct 271438 ATGTAGGAGACAGCTGAAGCTTATCTTGGTACTCCTGTCACCCATGCTGTGGTTACTGTC 271379 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 || ||||||||||||||||| || | ||||| || ||||| || ||| |||||||| Sbjct 271378 CCTGCTTATTTCAATGATGCTCAGAGACAAGCGACCAAAGACGCCGGAGCCATTGCTGGA 271319 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACC 451425 | |||||| | |||| || |||||||| Sbjct 271318 CTCAATGTTATGAGAATCATCAATGAACC 271290 Score = 96.9 bits (106), Expect = 1e-14 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| |||||||| || || || || || || ||||| ||||| | ||| Sbjct 171804 ATGCAAATCTTCGTGAAAACACTTACCGGAAAGACCATCACCCTTGAAGTTGAGCCTTCT 171863 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || ||||| ||||||||||| || ||||| || Sbjct 171864 GACACAATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAG 171923 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || |||||||||||||| | ||| | | || || || Sbjct 171924 CAGCGTCTTATCTTCGCTGGCAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 171983 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 171984 ATTCAGAAGGAGTCTACCCTTCA 172006 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || ||||| || || || || || |||||||| ||||| | || Sbjct 172031 AATGCAAATCTTCGTGAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTC 172090 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||||| | || || || || || ||||||||||| || || || || Sbjct 172091 TGACACTATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCACCCGACCA 172150 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || || | || || || ||||||||||| | |||||| | ||||| || Sbjct 172151 GCAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTTTGTCTGATTACAA 172210 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 || | || || | ||||| || Sbjct 172211 CATCCAGAAAGAATCCACACTCCA 172234 >seq431 Length=85469 Score = 105 bits (116), Expect = 3e-17 Identities = 144/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121 || ||||| |||||||||||||| ||||||||||| |||| ||| ||||||| ||||| Sbjct 84015 GTGAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGTATCTTCTGATACTATTGAG 84074 Query 391122 GCTATTAAACAAAAAATTCAAGATA--AGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | ||||| | || || |||| | |||||||| || ||||||||||| | | | Sbjct 84075 AATGTTAAAGGAGCTATACAGGATATGAAGAAGGAATCCCACCTGATCAACAGAGACTCA 84134 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 | | | || | |||| | |||||||| | || | | |||||||||||| | | || Sbjct 84135 TATATGCTGGTAGACAATTGGAAGATGGTTGTACACTCTCAGATTATAATATTCAAACGG 84194 Query 391240 ATGCAACACTTCACTTAGTA 391259 | ||| | || |||||| Sbjct 84195 AAAGCACAATACATTTAGTA 84214 Score = 98.7 bits (108), Expect = 4e-15 Identities = 123/168 (73%), Gaps = 3/168 (2%) Strand=Plus/Plus Query 391068 ACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA---TCTGATAACATTGAAGCT 391124 || ||||||||||||| ||||||||||| |||||| | ||||||| |||||| | Sbjct 84254 ACTCTGACTGGTAAAAGAATTACTCTTGAAGTTGAACCTAGCTCTGATACTATTGAAAAT 84313 Query 391125 ATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTC 391184 ||||| ||| || || ||| | | |||||| || ||||||||||| | | || || Sbjct 84314 GTTAAAGCAAAGATACAGGATGAAGTAGGAATCCCACCTGATCAACAGAGACTCATATTT 84373 Query 391185 TCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232 | || |||||| | |||||||| | || | | |||||||| ||| Sbjct 84374 GCTGGTAAACAATTAGAAGATGGTTGCACACTCTCAGATTATAACATT 84421 Score = 95.1 bits (104), Expect = 5e-14 Identities = 124/170 (73%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 391065 AAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCT 391124 ||||| ||||| |||||| | |||||||||| |||||| | ||||||| ||||| | Sbjct 81038 AAAACTCTGACCGGTAAAGCGATTACTCTTGGAGTTGAACCTTCTGATACTATTGAGAAT 81097 Query 391125 ATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACG--TTTAATTT 391182 ||||| || || || ||||| |||||||| || ||||||||||| | ||| |||| Sbjct 81098 GTTAAAGCGAAGATACAGGATAAAGAAGGAATCCCACCTGATCAACAGAGGCTTTTATTT 81157 Query 391183 TCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232 || || ||| | | |||||| | | || | | |||||||| ||| Sbjct 81158 GCT--GGTAAAGTATTGGAAGATAGTCGTACACTCTCAGATTATAAAATT 81205 Score = 93.3 bits (102), Expect = 2e-13 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 || || ||||| |||||||||||||| ||| |||||| | | | ||||||| ||| Sbjct 84482 TTTGTAAAAACTCTGACTGGTAAAACAATTTTTCTTGAAGCTTTACTGTCTGATACTATT 84541 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACG--TT 391176 ||| | ||||| ||| || || ||| | | |||||| | |||||||||| | || Sbjct 84542 GAAAATGTTAAAGCAAAGATACAGGATGAAGTAGGAATCTCATCTGATCAACAGAGGCTT 84601 Query 391177 TAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATA 391236 |||| || || |||||| | |||||||| | || | | |||||||||||| | | Sbjct 84602 GTATTTGCT--GGTAAACAATTAGAAGATGGTTGTACACTCTCAGATTATAATATTCAAA 84659 Query 391237 AGGA 391240 |||| Sbjct 84660 AGGA 84663 >seq50 Length=385273 Score = 102 bits (112), Expect = 3e-16 Identities = 260/389 (67%), Gaps = 20/389 (5%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 || ||||||||||||||||||||||| ||||| |||||||||||| || | | || | Sbjct 317391 AACCCTGATGAAGCTGTTGCATATGGAGCTGCCGTTCAAGCAGCTGTTTTGA---GTGGA 317447 Query 452051 GATGA---TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 ||||| || || | |||| | || |||| ||||| | ||||| |||||||| Sbjct 317448 GATGACAGTGGTAATGTTCAAGATGTATTGCTAGTGGATGTTGCTCCTCTTTCTCTTGGT 317507 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAAC--TTCTATTCCTT 452165 | ||||| ||||||||| | ||||| || | | | | ||||||| | || || Sbjct 317508 ATCGAAACTGCTGGTGGAGTAATGACAAACTGATTGA---GAGGAACAGTCGCATACC-- 317562 Query 452166 GTAA--AAAGAGTCAAACA--TTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATT 452221 || |||| || |||| || | || ||| || ||||| | ||| || || Sbjct 317563 --AACCAAAGCATCCAACACGTTCACTATTTATGCTGACAATCAACCTGCTGTCACCATA 317620 Query 452222 CAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACT 452281 ||||| ||||| || || | | |||||| ||| || ||| ||| || ||| Sbjct 317621 CAAGTATTTGAGGGGGAGAGGCCCATGACAAAAGACAACAATCTACTGGGTACTTTTGAA 317680 Query 452282 CTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTT 452341 | | |||||||||| || ||| |||| |||||||| | | | ||| | Sbjct 317681 TTGACTGGCATTCCTCCTGCACCTCATGGAGTTCCTAAAATTGAAGTCTCATTTGA-CAT 317739 Query 452342 GATGCAAATGGTATTCTTAATGTGAGTGC 452370 ||||| || | || ||| |||||||||| Sbjct 317740 GATGCTAACAGCATCCTTCATGTGAGTGC 317768 >seq460 Length=79726 Score = 96.9 bits (106), Expect = 1e-14 Identities = 137/190 (72%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112 |||||||| | ||||| |||||||||||||| ||||||||||| |||||| ||||| Sbjct 3007 AATATTTT--TAAAAACTCTGACTGGTAAAACCATTACTCTTGAAGTTGAACGCACTGAT 2950 Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172 | ||||| | |||| ||| || || || || ||||||||||| ||| ||||||| Sbjct 2949 AGTATTGAGAATGTTAAGATAAAGATACAGGAGAAAGAAGGAATTCCACCTAATCAACAG 2890 Query 391173 CG--TTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATA 391230 | || |||| | || | |||| | |||||||| || | | ||||||| | Sbjct 2889 AGACTTGTATTTGAT--GGTAGACAATTGGAAGATGGTCCTACACTCTCAGATTATAGGA 2832 Query 391231 TTGATAAGGA 391240 || | ||||| Sbjct 2831 TTCAAAAGGA 2822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975379244474984