Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq139 262 5e-65 >seq139 Length=216038 Score = 262 bits (290), Expect = 5e-65 Identities = 579/864 (67%), Gaps = 8/864 (1%) Strand=Plus/Minus Query 6953 CCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCA 7012 || ||||| ||||| | ||||| | ||| | || ||||| || || || || Sbjct 121009 CCGAGAGAAAGAGGAGCAACGTCAAGGAGAATGAGATCTTGCACCTCCTCACTCTTGTCT 120950 Query 7013 CCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072 || | || ||||| || ||||| | || || || || || || ||||| || || || Sbjct 120949 CCACTCAAAATGGCTGCATGGACAGCAGCTCCATAAGCAACAGCTTCATCAGGATTGATG 120890 Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132 | || |||||||| || || || || | ||| | | | || || || ||||| Sbjct 120889 GACTTGTTCAGTTCCTTCCCATTGAAGAAGTCCTGCAGGAGCTTCTGGATCTTAGGGATA 120830 Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT 7192 || || || ||||| |||| ||| || |||| | || || | || || | || Sbjct 120829 CGAGTGGAGCCACCAACCAGAACAATATCATGTATTTGACCTTCGTAGAATTTAGCATCA 120770 Query 7193 CGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCC 7249 || ||||| || || || |||| | ||| | | || | ||| | ||||| Sbjct 120769 CGGAGTGTCTTCTCAACTAGTTCGAGGATACGATAA---AAGAGGTCATTGTTGAGTTCT 120713 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 |||||||| ||||| || |||| || ||||| |||| ||| || | | || ||||| Sbjct 120712 TCAAAACGAGCACGAGTGATGGTAGTGTAGAAGTCAATGCCCTCAAAGAGAGAGTCAATC 120653 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||| | || ||| || | || || | | | ||| || | |||||| || || | Sbjct 120652 TCAATAGATGCTTGAGCACTGGAGGAGAGGATCCTCTTAGCTCTCTCACAGGCGGTCCTG 120593 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC- 7428 | ||||| ||| | | | || || | ||| || || ||| | | ||||| || ||| || Sbjct 120592 AGACGACAAAGAGAATGTGGATTGCTGGACATGTCCTTCATGTATTTACATTGAAATTCC 120533 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||| | || ||| || | | ||||||||||| ||||| ||||||||||| | || Sbjct 120532 TTCATAAAATAGTC-AACCATGCGAGAATCGAAATCCTCACCTCCCAAGTGTGTGTTGCC 120474 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 | || | | |||||||| || || | ||||| | | | || ||| ||| | Sbjct 120473 GGAAGTGGACCTCACTTCAAATATGCCGTCCTCAATTGTAAGGATGGAGACACTAAAATT 120414 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 || |||||||| ||||| ||||| |||||| | || || | ||||| |||||||| Sbjct 120413 ACTACCACCCAAATCAAAGATGAGGACGTTCCTCTCTTCTTTAACTTTCTTGTCGAGACC 120354 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| || || || || || || || || || || ||||| || ||| || ||||| || Sbjct 120353 GTAGGCAATGGCAGCAGCTGTGGGCTCGTTGATGATACGCAGGACGTTGAGACCAGCTAT 120294 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 ||| | || ||||| || || || ||||| || || || ||||| || ||||| || | Sbjct 120293 GGTTCCGGCGTCTTTTGTTGCCTGACGTTGTGAGTCATTGAAGTAAGCAGGGACTGTAAT 120234 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||| | || ||||| |||| || || || | || || | || ||||||| || || Sbjct 120233 GACTACATCAGTGACAGTCTTCCCAAGGTAAGCCTCAGCTGTCTCCCTCATTTTAGTGAG 120174 Query 7789 AACCATCGATGAAATCTCTTCAGC 7812 ||||| || || | ||||||||| Sbjct 120173 GACCATAGAGGACACCTCTTCAGC 120150 Score = 237 bits (262), Expect = 2e-57 Identities = 538/800 (67%), Gaps = 18/800 (2%) Strand=Plus/Minus Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078 || ||||| || | ||| | || || || ||||| || ||||| || || || | || Sbjct 127499 AAAATGGCTGCATAGACAGCAGCTCCATAAGCGACAGCTTCATCAGGATTGATGGACTTG 127440 Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138 |||||||| || || || || | ||| | | | || || || ||||| || || Sbjct 127439 TTCAGTTCCTTCCCATTGAAGAAGTCCTGGAGGAGCTTCTGGATCTTAGGGATACGAGTG 127380 Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198 || ||||| |||| ||| || |||| | || ||| | || || || ||| Sbjct 127379 GAACCACCAACCAGAACAATATCATGTATTTG------ATCAACTCCTGCATCACGGAGT 127326 Query 7199 GTTTTTTCGACAGGTTCCATACATTTACG---GAACAAGTCCATACACAGTTCCTCAAAA 7255 | || ||||| |||||| | |||| ||| | ||| | ||||| |||||| Sbjct 127325 GCCTTCTCGACTAGTTCCA---AGGTACGATGGAAGAGGTCAGCATTGAGTTCTTCAAAA 127269 Query 7256 CGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATG 7315 || ||||| || |||| || ||||| |||| ||| || | | || ||||| ||||| Sbjct 127268 CGAGCACGAGTGATGGTAGTGTAGAAGTCAATGCCCTCAAAGAGAGAGTCAATCTCAATA 127209 Query 7316 GTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGA 7375 || ||| || | || || | || | ||| || | |||||| || || | | |||| Sbjct 127208 AATGCTTGAGCACTGGAGGAGAGGGTCCTCTTAGCTCTCTCACAGGCGGTCCTGAGACGA 127149 Query 7376 CGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC-TTCAGA 7434 | | | ||| ||||| | ||| || || ||| | | |||||||| ||| || |||| Sbjct 127148 CAGACAGAACGTGGGTTGCTGGACATGTCCTTCATGTATTTACGTTGAAATTCCTTCAT- 127090 Query 7435 GAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGG 7493 ||||| ||| || | | ||||| ||||| ||||| |||||||| || || || Sbjct 127089 GAAGTAGTC-AACCATACGAGAATCAAAATCCTCACCTCCCAAGTGAGTGTCACCAATAA 127031 Query 7494 TCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCAC 7553 | | || |||||||| || || ||||| | | || |||||||| |||| | Sbjct 127030 TAGACTTCACTTCAAATATGCCATTCTCAATTGCAAGGATGGAGACATCAAAATTACCCC 126971 Query 7554 CACCCAGGTCAAAAATGAGTACGTTCGTATC-GTCGTCTTTGTTCTTATCGAGACCGTAC 7612 |||||| ||||| ||||| | ||| | || ||| | || || || |||| ||| Sbjct 126970 CACCCAAATCAAAGATGAGGATATTCCTCTCTGTCCCAGCTTTT-TTGTCCAGACTGTAG 126912 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTT 7672 || || || || ||||| || || || || ||||| || ||| || ||||||||| || Sbjct 126911 GCAATGGCAGCAGCCGTGGGCTCGTTGATGATACGTAGGACGTTGAGACCAGCAATAATT 126852 Query 7673 GCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACC 7732 | |||||||| || ||||| ||||| ||| || ||||| || || || || | ||| Sbjct 126851 CCAGCATCTTTTGTTGCTTGACGTTGTGAAATATTGAAGTAAGCAGGAACTGTAATGACT 126792 Query 7733 GCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACC 7792 | || ||||| |||| || || || | || || | || ||||||| || || ||| Sbjct 126791 ACATCAGTGACAGTCTTCCCAAGGTAAGCCTCAGCTGTCTCCCTCATTTTAGTGAGGACC 126732 Query 7793 ATCGATGAAATCTCTTCAGC 7812 | || |||||||||||||| Sbjct 126731 ACAGAGGAAATCTCTTCAGC 126712 Score = 167 bits (184), Expect = 3e-36 Identities = 413/619 (67%), Gaps = 16/619 (3%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 || ||| ||| |||||||||||| ||||| ||||| || ||| | || || | Sbjct 124728 GAGACACTAAAATTACCACCACCCAAATCAAAGATGAGGACATTCCTCTCTTCTTTAACT 124669 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| |||||||||| | ||| || || || | |||||||| || ||||| || | Sbjct 124668 TTCTTGACGAGACCGTAGGTGATGGCAGCAGCTGAGGGTTCATTCATGATACGCAGGACG 124609 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || ||||| || ||| | || ||||| || || || ||||| || ||||| ||||| Sbjct 124608 TTGAGACCAGCTATGGTTCCAGCGTCTTTTGTTGCCTGACGTTGTGAGTCGTTGAAGTAA 124549 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || | ||| | || ||||| |||| || || || | || || | || Sbjct 124548 GCAGGGACTGTAATGACTACATCAGTGACAGTCTTCCCAAGGTAAGCCTCAGCTGTCTCC 124489 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACC 7833 ||||||| || || ||||| || || |||||||||| || | | || || || || || Sbjct 124488 CTCATTTTAGTGAGGACCATAGAGGATATCTCTTCAG-CGTAGAAGGTCTTAGTCTCCCC 124430 Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCG-CAGCACCGGGGATAACCTTATACGACC 7892 | || || | ||| | || | | || || | || || | | | || Sbjct 124429 CAAGTATTCCACCTGGATCTTAGG----GCGGCCATCAGTGTTAATGACAGCAAATGGCC 124374 Query 7893 AAT-CTTTCA--TATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCT 7949 | | ||| || | || || || | | || ||||| ||||| || || |||| Sbjct 124373 AGTGCTTGCAGTCAGCGGCT---ACTTTAGGATCGTTGAACTTCCTTCCAATGAGTCGCT 124317 Query 7950 TTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGA 8009 | |||||||| || ||||| |||| |||||||| |||||||| || || || || | Sbjct 124316 TGGCATCAAAGACAGTGTTGATGGGATTCATGGCGACCTGGTTCTTTGCTGCATCTCCAA 124257 Query 8010 TAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGT 8069 | ||||| || | || || || ||||| || ||||| || | ||||| |||| Sbjct 124256 TGAGACGCTC---CGTGTCAGTGAAGGCGACATAGCTAGGGGTAGTCCTGTTCCCCTGGT 124200 Query 8070 CGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTC 8129 |||| | || |||||||| | | || | || ||||| || || | || || | Sbjct 124199 CGTTGGTGATGATTTCTACTTTCCCATGCTGGAACACACCGACACAGGAGTGAGTGGTAC 124140 Query 8130 CTAAATCAATACCGATTGC 8148 | | |||||||| ||| || Sbjct 124139 CCAGATCAATACTGATGGC 124121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635026431134320