Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq957 80.6 7e-11 >seq957 Length=24779 Score = 80.6 bits (88), Expect = 7e-11 Identities = 134/192 (70%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 35813 TGCCTTTATCGTGCGACAACAAATTCTTCACGTTTTCCAACACGAAGGCCGCAGGTCGCT 35872 ||||||| || ||| | | |||||| || || |||| || ||| || || || | Sbjct 777 TGCCTTTGTCATGCCGCTCGAGATTCTTTACATTCTCCAGCAAAAAGATCGGGGGGCGAT 718 Query 35873 TCGCTG--CGATGATCCGGGCTACGTCGAAAAATAGAGTGCCCTGAGTAGTGCACTCGAA 35930 | || ||||||| | || | || |||| ||||| || || || |||| ||| Sbjct 717 --GATGATCGATGATTCTCGCCAAATCATAAAACAGAGTTCCTTGGGTTTCGCACAGGAA 660 Query 35931 GCCGTGCGGGCGGCCCAGTGAGTTCTTTTTGCTTACTCCCGCGATACTAAACGGCTGGCA 35990 |||||||| ||||||| | ||||||||||| || || ||||| ||| |||||||| Sbjct 659 TCCGTGCGGACGGCCCAAGGCATTCTTTTTGCTGACCCCGGCGATCGAAAAAGGCTGGCA 600 Query 35991 AGGGAAGCCGGC 36002 ||| || || || Sbjct 599 AGGAAACCCCGC 588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129633771822892