Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq586 84.2 3e-11 >seq586 Length=56575 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142214 CGGGGTGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCAAA 142273 ||||||||||||||| |||||||||||| ||| ||||| || || || ||||||||| Sbjct 22468 CGGGGTGTAGCTCAGCCTGGTAGAGCACTGCCTTCGGGAGGCAGGGGTCGGAGGTTCAAA 22527 Query 142274 TCCTATCACCCCGA 142287 |||| ||||||||| Sbjct 22528 TCCTCTCACCCCGA 22541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610294573795920