Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq89 172 1e-37 seq431 132 9e-26 seq460 120 5e-22 seq78 105 1e-17 seq85 104 4e-17 seq63 89.7 9e-13 >seq89 Length=276290 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||| | | || | ||||||||| || ||| ||||| ||| ||||||||| Sbjct 106381 ATGCCACCTCGACGACGAAGTACTAAATGCAACGTACTTTCTTTTTGAATGTTATAATCT 106322 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || ||||||||| |||||||||| || | ||||||||| |||||| Sbjct 106321 GAGAGTGTACGACCATCTTCCAATTGTCTACCAGCAAATATGAGTCTCTGTTGATCAGGT 106262 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||||||||| ||||| || ||| | ||| |||||||| || | ||| Sbjct 106261 GGGATTCCTTCTTTATCCTGTATCTTTGCTTTAATATTCTCCATAGTATCAGAAGGTTCA 106202 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| ||||||||||| | ||||| | ||||| ||||| Sbjct 106201 ACTTCAAGAGTAATTGTTTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106152 Score = 163 bits (180), Expect = 5e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 171860 TACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATC 171919 |||||||||||| ||| || || ||| ||||||||||| | | || | || || Sbjct 106589 TACTAAATGTAATGTACTTTCCTTTTGAATGTTATAATCTGAGAGTGTACGACCATCTTC 106530 Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 |||| |||||||||||| || | ||||||||| |||||||| |||||||||||||| || Sbjct 106529 CAATATTTTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTG 106470 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 ||| || ||| ||||| |||||||| || | ||| ||||| |||||||| ||||| Sbjct 106469 TATCTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTTT 106410 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| | ||||| | ||||| ||||| Sbjct 106409 ACCAGTCAGAGTTTTTACAAATATTTGCAT 106380 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 171863 TAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAA 171922 ||||| || ||| ||| | | ||| ||||||||||| | | || || || |||| Sbjct 108011 TAAATCTATTGTATCCTTTGTTTTAATGTTATAATCTGAGAGTGTACGATCATCTACCAA 107952 Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 | |||||||||||| || | ||||||||| |||||||| |||||||||||||| ||||| Sbjct 107951 TACTTTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGTAT 107892 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 || ||| ||||| |||||||| || | ||| ||||| |||||||| ||| |||| Sbjct 107891 CTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTCTACC 107832 Query 172043 AGTTAATGTTTTAATGAATATCTGCAT 172069 ||| | ||||| | ||||| ||||| Sbjct 107831 AGTCAGAGTTTTTACAAATATTTGCAT 107805 Score = 132 bits (146), Expect = 9e-26 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||||||| || | |||||||||||||||| || || ||| ||||||||| Sbjct 106153 ATGCCACCTCTAAGACGAAGTACTAAATGTAAAGTACTTTCATTTTGAATGTTATAATCT 106094 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | ||||||||||||||| |||| || | ||||||||| |||||| Sbjct 106093 GAGAGTGTACGACCATTTTCCAATTGTTTACCAACAAATATCAGTCTCTGTTGATCAGGT 106034 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA 171995 || ||||||||||| || |||||||| | ||| ||| Sbjct 106033 GGGATTCCTTCTTTGTCCTGTATTTTCTCTTTCACA 105998 Score = 105 bits (116), Expect = 1e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977 |||||||||||||||||||| || | | ||||||| |||||||| |||| ||||||||| Sbjct 106771 TCCAATTGTTTACCAGCAAATATAAGTTTCTGTTGATCAGGTGGGATTCTTTCTTTATCC 106712 Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037 ||||| || ||| ||||| ||||||| || | ||| |||| ||| ||| || Sbjct 106711 TGTATCTTTGCTTTAACATTCTCAATAGTATTAGAAGGTTCAACTTGCAGAAAAATTATT 106652 Query 172038 TTACCAGT 172045 |||||||| Sbjct 106651 TTACCAGT 106644 >seq431 Length=85469 Score = 132 bits (146), Expect = 9e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||||| ||| || | ||||||||| | || || | ||||| ||||||||||| Sbjct 81250 ACCACCTCGAAGACGGAGTACTAAATGCATTATATTTTCCATTGAAATTTTATAATCTGA 81191 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | || || |||||| |||||||||||| | | |||||||| |||||||| Sbjct 81190 GAGTGTACGACTATCTTCCAATACTTTACCAGCAAATAAAAGCCTCTGTTGATCAGGTGG 81131 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 |||||||||||||| ||||| || ||| ||||| |||||||| || | ||| || Sbjct 81130 GATTCCTTCTTTATCCTGTATCTTCGCTTTAACATTCTCAATAGTATCAGAAGGTTCAAC 81071 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 172057 | | |||||||| | |||||| || | ||||| || Sbjct 81070 TCCAAGAGTAATCGCTTTACCGGTCAGAGTTTTTAT 81035 Score = 131 bits (144), Expect = 3e-25 Identities = 162/217 (75%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCT--CTTTAGAAATATTATAATCT 171899 |||||||| | || | ||||||||||| || || | | || ||| ||||||||||| Sbjct 84232 ACCACCTCGATAACGAAGTACTAAATGTATTGT-GCTTTCCGTTTGAA-TATTATAATCT 84175 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | | | || ||||||||| |||||||| | || | ||||||||| |||||| Sbjct 84174 GAGAGTGTACAACCATCTTCCAATTGTCTACCAGCATATATGAGTCTCTGTTGATCAGGT 84115 Query 171960 GGTATTCCTTCTT--TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATT 172017 || |||||||||| |||| ||||| ||| ||||| |||||||| || ||| Sbjct 84114 GGGATTCCTTCTTCATATCCTGTATAGCTCCTTTAACATTCTCAATAGTATCAGAAGATA 84055 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 | ||||| |||||||| ||||||||||| | ||||| Sbjct 84054 CAACTTCAAGAGTAATTGTTTTACCAGTCAGAGTTTT 84018 Score = 114 bits (126), Expect = 2e-20 Identities = 123/162 (76%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| ||||||||||| | | | | || || ||||||||||||||||| || | ||| Sbjct 84421 AATGTTATAATCTGAGAGTGTGCAACCATCTTCTAATTGTTTACCAGCAAATATGAGTCT 84362 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 |||||| |||||||| |||||| ||| ||| ||||| || ||| ||||| ||||| Sbjct 84361 CTGTTGATCAGGTGGGATTCCTACTTCATCCTGTATCTTTGCTTTAACATTTTCAATAGT 84302 Query 172007 ATCTGA---CGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 ||| || | ||| ||||| |||||||| |||||||||| Sbjct 84301 ATCAGAGCTAGGTTCAACTTCAAGAGTAATTCTTTTACCAGT 84260 Score = 96.9 bits (106), Expect = 6e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 171864 AAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAAT 171923 ||||||| ||| || || ||||||||||||||| | | | | || || ||| Sbjct 84678 AAATGTATTGTACTTTCCTTTTGAATATTATAATCTGAGAGTGTACAACCATCTTCTAAT 84619 Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 |||||||||||||| | | |||||||| |||| || |||||| ||| ||| ||||| Sbjct 84618 TGTTTACCAGCAAATACAAGCCTCTGTTGATCAGATGAGATTCCTACTTCATCCTGTATC 84559 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || ||| ||||| |||||||| ||| | |||| ||| ||| ||||||||| Sbjct 84558 TTTGCTTTAACATTTTCAATAGTATCAGACAGTAAAGCTTCAAGAAAAATTGTTTTACCA 84499 Query 172044 GTTAATGTTTT 172054 || | ||||| Sbjct 84498 GTCAGAGTTTT 84488 Score = 84.2 bits (92), Expect = 4e-11 Identities = 129/183 (70%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 || |||||||| | | | | || | || |||||| |||||||||||| | | || Sbjct 81442 AAGATTATAATGTAAGAGTGTACGACCATCTTCCAATACTTTACCAGCAAATAAAAGCCT 81383 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 |||||| |||||||| |||||| ||||||| ||||| || ||| | ||| ||||| Sbjct 81382 CTGTTGATCAGGTGGGATTCCTACTTTATCCTGTATCTTGGCTTTGATATTCTCAATAGT 81323 Query 172007 ATCTGACGATTCTACTT---CTAGAGTAATGGTTTT---ACCAGTTAATGTTTTAATGAA 172060 ||| || | ||| |||| | || |||| |||| |||||| | ||||| | || Sbjct 81322 ATCAGAAGGTTCAACTTGAAATTGAATAATATTTTTTGCACCAGTCAGAGTTTTTACAAA 81263 Query 172061 TAT 172063 ||| Sbjct 81262 TAT 81260 >seq460 Length=79726 Score = 120 bits (132), Expect = 5e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||| || | | || |||| |||| ||| || || ||| |||||||| Sbjct 2783 ATACCACCTTGAACACAAAGTAATAAAAGTAATGTACTTTCCTTTTGAATCCTATAATCT 2842 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | | | || ||||||||| ||||| |||| | | ||||||||| | |||| Sbjct 2843 GAGAGTGTAGGACCATCTTCCAATTGTCTACCATCAAATACAAGTCTCTGTTGATTAGGT 2902 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| || ||||| || | || ||||| ||| |||| | ||| Sbjct 2903 GGAATTCCTTCTTTCTCCTGTATCTTTATCTTAACATTCTCAATACTATCAGTGCGTTCA 2962 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATAT 172063 ||||| |||||||||||||||||||| | ||||| | ||||| Sbjct 2963 ACTTCAAGAGTAATGGTTTTACCAGTCAGAGTTTTTAAAAATAT 3006 >seq78 Length=312069 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| || | || || | || ||||| || || || ||||| || | | | Sbjct 172669 ATGTTGTAATCGGAAAGAGTACGGCCATCTTCCAACTGCTTTCCGGCAAAGATAAGACGC 172610 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| ||||||||||| ||||| |||||| ||| ||||| ||||| Sbjct 172609 TGCTGATCGGGTGGGATTCCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTG 172550 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || | || ||||| ||||| ||||| || || || | ||| || | ||| |||||| Sbjct 172549 TCAGAAGGCTCAACTTCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAAATCTGC 172490 Query 172068 ATT 172070 ||| Sbjct 172489 ATT 172487 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || || || || || | || | ||| | |||| |||||| || || ||||| Sbjct 172489 ATTCCTCCCCTGAGGCGGAGAACAAGATGAAGTGTAGACTCTTTTTGGATGTTGTAATCA 172430 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || || | || || |||||||| || | | ||| || || ||| Sbjct 172429 GACAAAGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCGGGT 172370 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || ||||| || || |||||| || || ||||| || | || Sbjct 172369 GGAATTCCTTCCTTGTCTTGAATCTTGGCTTTTACGTTTTCAATGGTATCGGAAGGCTCA 172310 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| ||||||||||| || || || || || || | || || |||||| Sbjct 172309 ACTTCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATT 172259 >seq85 Length=280044 Score = 104 bits (114), Expect = 4e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| || | | ||| | || ||||| |||||||||||||| || | || | Sbjct 114606 ATGTTATAATCAGAGAGGGTTCGACCATCCTCCAACTGTTTACCAGCAAAGATGAGTCGC 114547 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || |||||||| || || ||||| || || || || || |||||||| ||| ||| Sbjct 114546 TGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATGGTA 114487 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || | || || ||||| || ||||| || ||||| | || || | || |||||| Sbjct 114486 TCAGAAGGCTCGACCTCTAGCGTGATGGTCTTCCCAGTGAGAGTCTTGACAAAAATCTGC 114427 Query 172068 ATTTT 172072 || || Sbjct 114426 ATCTT 114422 >seq63 Length=354714 Score = 89.7 bits (98), Expect = 9e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171863 TAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAA 171922 |||||||| ||| | | || ||| ||||||||||| | | || | || || || Sbjct 352486 TAAATGTATTGTATCTTTATTTTGAATGTTATAATCTGACAGTGTACGACCATCTTCTAA 352545 Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 | | || |||||| || | |||||| || |||||||| |||||||||||||||| ||| Sbjct 352546 TCTTCTAAAAGCAAATATGAGTCTCTGCTGATCAGGTGGGATTCCTTCTTTATCTTTTAT 352605 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 || ||| ||||| |||||||| || | ||| || || |||| ||||||| Sbjct 352606 CTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAGTATCAAGCATAATTATTTTACC 352665 Query 172043 AG 172044 || Sbjct 352666 AG 352667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904984412348400