Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_021348.1 Length=156558 Score E Sequences producing significant alignments: (Bits) Value seq3137 87.8 2e-12 >seq3137 Length=6657 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/146 (74%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 114586 GGCCCGGGCCGTGGCTCTGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 114645 |||||||| || ||||| | || |||||||||||| |||||| | ||||||| | ||| Sbjct 1416 GGCCCGGGGCGGGGCTCCGGCGTCGGCTCGCTGGTCGCCTACGCCTTGGGCAT--CGTCG 1359 Query 114646 A--TCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCCG 114703 | |||| || | | |||||| || | ||||| ||||| ||||| | || ||| | Sbjct 1358 ATCTCGATCCCTTGTACTACGACTTGCTCTTCGAACGCTTCCTCAACACCGAGCGCATCT 1299 Query 114704 ACTTCCCCGACATCGACGTCGACTTC 114729 ||| ||||| |||| ||||| ||| Sbjct 1298 CCTTGCCCGATTTCGATGTCGATTTC 1273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500773718873440