Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq10 91.5 2e-12 >seq10 Length=765180 Score = 91.5 bits (100), Expect = 2e-12 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1254413 CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGAC 1254472 |||||| | || ||||||||| |||||| || | || |||| ||||| ||||| Sbjct 345182 CTTGTTGTATTGAGCCAGACGGGAGGCCTCAGTAGCAATCTTCTCGAAGATGTCATTGAC 345123 Query 1254473 AAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1254532 ||| |||||||||| ||| | ||| |||||| || |||||||| |||||||| Sbjct 345122 AAAGGAGTTCATGATACTCATGGCCTTTGAGGAGATACCAGTCTCGGGGTGGACCTGCTT 345063 Query 1254533 GAGCACCTTGTAGAT 1254547 ||| ||||||||||| Sbjct 345062 GAGGACCTTGTAGAT 345048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106039697377166