Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq89 147 3e-30 seq431 122 1e-22 seq78 105 1e-17 >seq89 Length=276290 Score = 147 bits (162), Expect = 3e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| ||||||| | || || |||||||||||| |||| || |||| | | Sbjct 106153 TGCAAATATTTGTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTCTG 106212 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| | ||| | ||| || ||||| ||||||||| || ||||| ||||||| Sbjct 106213 ATACTATGGAGAATATTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAAC 106272 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| ||||| |||| |||||| || ||| | | || | |||||||||| | Sbjct 106273 AGAGACTCATATTTGCTGGTAGACAATTGGAAGATGGTCGTACACTCTCAGATTATAACA 106332 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||||||| || | ||||||||| Sbjct 106333 TTCAAAAAGAAAGTACGTTGCATTTAGTA 106361 Score = 147 bits (162), Expect = 3e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| ||||||| | || || |||||||||||| |||| || |||| | | Sbjct 106381 TGCAAATATTTGTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTCTG 106440 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| || ||||| ||||||||| || ||||| ||||||| Sbjct 106441 ATACTATTGAGAATGTTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAAC 106500 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| ||||| |||||| ||| || ||| | | || | |||||||||| | Sbjct 106501 AGAGACTCATATTTGCTGGTAAAATATTGGAAGATGGTCGTACACTCTCAGATTATAACA 106560 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||| ||| || | ||||||||| Sbjct 106561 TTCAAAAGGAAAGTACATTACATTTAGTA 106589 Score = 107 bits (118), Expect = 3e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || ||| ||| ||| | |||||||| |||||||| || ||||| |||||| Sbjct 105984 GATACCGTTGAAAGTGTGAAAGAGAAAATACAGGACAAAGAAGGAATCCCACCTGATCAA 106043 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||||| || |||| ||||||||||| || || | | || | |||||||||| Sbjct 106044 CAGAGACTGATATTTGTTGGTAAACAATTGGAAAATGGTCGTACACTCTCAGATTATAAC 106103 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || ||||| ||| ||| | ||||||||| | || | ||||| || | ||||||| Sbjct 106104 ATTCAAAATGAAAGTACTTTACATTTAGTACTTCGTCTTAGAGGTGGCATGCAAATATT 106162 >seq431 Length=85469 Score = 122 bits (134), Expect = 1e-22 Identities = 127/166 (77%), Gaps = 3/166 (2%) Strand=Plus/Plus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAACATAAC---GATACTATTCAAAATGTAAAA 146111 || || |||| ||||||| |||| || |||| || | ||||||||| ||||||| ||| Sbjct 84260 ACTGGTAAAAGAATTACTCTTGAAGTTGAACCTAGCTCTGATACTATTGAAAATGTTAAA 84319 Query 146112 AATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGT 146171 || ||||| | ||| ||| || ||||| |||||||| |||||||| ||||| ||| Sbjct 84320 GCAAAGATACAGGATGAAGTAGGAATCCCACCTGATCAACAGAGACTCATATTTGCTGGT 84379 Query 146172 AAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAA 146217 ||||||||||| ||| | | || | |||||||||| || |||| Sbjct 84380 AAACAATTAGAAGATGGTTGCACACTCTCAGATTATAACATTCAAA 84425 Score = 111 bits (122), Expect = 2e-19 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 ||||| | || || |||||||||||| |||| || | | | ||||||||| | ||| Sbjct 84018 AAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGTATCTTCTGATACTATTGAGAAT 84077 Query 146106 GTAAAAAATAAAATACAACTTA--AAGAAGGCATTCCACCCGATCAACAAAGACTCATTT 146163 || ||| ||||| || ||||||| || ||||| |||||||| |||||||| | Sbjct 84078 GTTAAAGGAGCTATACAGGATATGAAGAAGGAATCCCACCTGATCAACAGAGACTCATAT 84137 Query 146164 TTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAAT 146223 ||| |||| |||||| || ||| | | || | ||||||||||||| |||| ||| Sbjct 84138 ATGCTGGTAGACAATTGGAAGATGGTTGTACACTCTCAGATTATAATATTCAAACGGAAA 84197 Query 146224 CGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 || || ||||||||| | || | |||| ||| Sbjct 84198 GCACAATACATTTAGTACTTCGTTATCGAGGTGGT 84232 Score = 96.9 bits (106), Expect = 5e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 146044 TAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAA 146103 ||||||| | || || ||||||||| | |||| | || ||||||||| ||| Sbjct 84486 TAAAAACTCTGACTGGTAAAACAATTTTTCTTGAAGCTTTACTGTCTGATACTATTGAAA 84545 Query 146104 ATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTT 146163 |||| ||| || ||||| | ||| ||| || || | |||||||| || || | | Sbjct 84546 ATGTTAAAGCAAAGATACAGGATGAAGTAGGAATCTCATCTGATCAACAGAGGCTTGTAT 84605 Query 146164 TTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAAT 146223 |||| |||||||||||||| ||| | | || | ||||||||||||| ||||| ||| Sbjct 84606 TTGCTGGTAAACAATTAGAAGATGGTTGTACACTCTCAGATTATAATATTCAAAAGGAAA 84665 Query 146224 CGACTATCCATTT 146236 || || ||||| Sbjct 84666 GTACAATACATTT 84678 >seq78 Length=312069 Score = 105 bits (116), Expect = 1e-17 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||| ||| | || ||||| || || ||| |||| || || | | | Sbjct 172489 TGCAGATTTTCGTAAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTCTG 172548 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| ||| |||||| ||| |||||||| || ||||||||||| | Sbjct 172549 ACACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGAATCCCACCCGATCAGC 172608 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| || || || || || ||| | || | | ||||| || | Sbjct 172609 AGCGTCTTATCTTTGCCGGAAAGCAGTTGGAAGATGGCCGTACTCTTTCCGATTACAACA 172668 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| || ||||| | || | || | || ||||| Sbjct 172669 TCCAAAAGGAATCTACACTCCATCTTGTTCTCCGCCTCAGGGGAGG 172714 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || ||||| || |||||| |||| || || | | || Sbjct 172261 TGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTTGAAGTTGAGCCTTCCG 172320 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||| |||||| || || ||| || ||||| |||||||||||||| | Sbjct 172321 ATACCATTGAAAACGTAAAAGCCAAGATTCAAGACAAGGAAGGAATTCCACCCGATCAGC 172380 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| || || || | || ||| | || || | ||||| || | Sbjct 172381 AGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACTTTGTCTGATTACAACA 172440 Query 146212 TACAAAAAGAATCGAC 146227 | |||||||| || || Sbjct 172441 TCCAAAAAGAGTCTAC 172456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786034736782160