Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq89 147 2e-30 seq78 129 5e-25 seq523 122 7e-23 seq431 100 2e-16 seq85 95.1 9e-15 seq460 87.8 1e-12 >seq89 Length=276290 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || ||||| | ||| ||||||||||||||||||||| | | || ||| Sbjct 106367 ACGAAGTACTAAATGCAACGTACTTTCTTTTTGAATGTTATAATCTGAGAGTGTACGACC 106308 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||| | |||||| |||| | ||| || ||||| || || || || ||||| Sbjct 106307 ATCTTCCAATTGTCTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTT 106248 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || |||| ||| ||| | | | || | ||| |||||| |||| ||||||||||| || Sbjct 106247 ATCCTGTATCTTTGCTTTAATATTCTCCATAGTATCAGAAGGTTCAACTTCAAGAGTAAT 106188 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| | ||||| |||||||| ||||| Sbjct 106187 TGTTTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106152 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 |||| || || ||||| | || ||| ||||||||||||||||| | | || ||| Sbjct 106597 AAACAAAGTACTAAATGTAATGTACTTTCCTTTTGAATGTTATAATCTGAGAGTGTACGA 106538 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| || | | ||| |||||| |||| | ||| || ||||| || || || || ||| Sbjct 106537 CCATCTTCCAATATTTTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCT 106478 Query 29689 TTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 || || |||| ||| ||| ||| | || | ||| |||||| |||| ||||||||||| Sbjct 106477 TTATCCTGTATCTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACTTCAAGAGTA 106418 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| | ||||| |||||||| ||||| Sbjct 106417 ATTGTTTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106380 Score = 116 bits (128), Expect = 3e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 29600 TTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCA 29659 ||| |||||||||||| | | || ||| ||| | | | ||| |||||| |||| | Sbjct 107991 TTTTAATGTTATAATCTGAGAGTGTACGATCATCTACCAATACTTTACCAGCAAATATGA 107932 Query 29660 ATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTA 29719 ||| || ||||| || || || || ||||| || |||| ||| ||| ||| | || | Sbjct 107931 GTCTCTGTTGATCAGGTGGGATTCCTTCTTTATCCTGTATCTTTGCTTTAACATTCTCAA 107872 Query 29720 CAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATA 29779 ||| |||||| |||| ||||||||||| || ||| | ||||| | ||||| ||||||| Sbjct 107871 TAGTATCAGAAGGTTCAACTTCAAGAGTAATTGTTCTACCAGTCAGAGTTTTTACAAATA 107812 Query 29780 TCTGCAT 29786 | ||||| Sbjct 107811 TTTGCAT 107805 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | ||| || || ||||| | || ||| ||||||||||||||||| | Sbjct 106150 CCACCTCTAAGACGAAGTACTAAATGTAAAGTACTTTCATTTTGAATGTTATAATCTGAG 106091 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| || || | |||||| ||| || |||||| ||| || ||||| || || Sbjct 106090 AGTGTACGACCATTTTCCAATTGTTTACCAACAAATATCAGTCTCTGTTGATCAGGTGGG 106031 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || |||||||| |||| ||| | ||| ||| |||| || || ||| | || ||| Sbjct 106030 ATTCCTTCTTTGTCCTGTATTTTCTCTTTCACACTTTCAACGGTATCACTAGCCTCAACT 105971 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAA 29773 ||||||| || | | |||| ||| | ||||| Sbjct 105970 TCAAGAGATAGTGACTCGCCAACTAACGGTTTAA 105937 >seq78 Length=312069 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||| | || || || | |||||| || || |||||||| ||||| ||||| | Sbjct 172487 TCCTCCCCTGAGGCGGAGAACAAGATGAAGTGTAGACTCTTTTTGGATGTTGTAATCAGA 172428 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || || || ||||||||| | || | | |||||||| || || Sbjct 172427 CAAAGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCGGGTGG 172368 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || |||||||| ||| || | ||| || |||| | || || ||| | || | Sbjct 172367 AATTCCTTCCTTGTCTTG-AATCTTGGCTTTTACGTTTTCAATGGTATCGGAAGGCTCAA 172309 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||||||| || || || || || || || || ||||| || |||||| Sbjct 172308 CTTCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATT 172259 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||| | || || || | ||| || || ||||| ||||| ||||| ||||| | Sbjct 172715 TCCTCCCCTGAGGCGGAGAACAAGATGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGA 172656 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || || ||| || | || || || ||| | || | | |||||||| || || Sbjct 172655 AAGAGTACGGCCATCTTCCAACTGCTTTCCGGCAAAGATAAGACGCTGCTGATCGGGTGG 172596 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||||||||| | ||| ||| ||| |||| | |||||||||| | || || Sbjct 172595 GATTCCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGCTCAAC 172536 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||||||| || || || || || | || || || || ||||||||| Sbjct 172535 TTCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172487 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| || | || || || | ||| || ||||||||||| || ||||| ||||| | Sbjct 172259 TCCTCCTCTGAGGCGGAGAACAAGATGGAGTGTGGATTCTTTCTGGATGTTGTAATCAGA 172200 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || || || || || ||| | || | | ||||| || || || Sbjct 172199 CAAAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCGGGTGG 172140 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || | || ||||| | || | |||||||||| | || || Sbjct 172139 GATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCAATAGTGTCAGAAGGCTCAAC 172080 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||||||| || || || || || | || || || || || |||||| Sbjct 172079 TTCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTCACGAAGATTTGCATT 172031 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| || || || | |||||| || || || ||||||||||| || || | Sbjct 172942 CCACCCCTCAGGCGGAGAACAAGATGAAGTGTAGACTCCTTTTGAATGTTGTAGTCAGAC 172883 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | || || |||||| | || | | || ||||| || || Sbjct 172882 AAAGTACGGCCATCTTCCAACTGCTTTCCAGCAAAGATAAGACGCTGTTGATCAGGTGGG 172823 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || |||||| | || | || |||||| | || ||| Sbjct 172822 ATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTATCAGAAGGCTCAACT 172763 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||||| || || || || || | || || || || ||||||||| Sbjct 172762 TCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172715 >seq523 Length=66199 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || |||||| ||||||| |||||||| | | ||| ||| || || | |||||||||| Sbjct 29240 GTAGATTCTCTTTGAATATTATAATCGGATAAGGTACGATCATTTTCCATTTGTTTGCCA 29181 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 ||||| || | ||| |||||| || ||| |||| ||||||||||| |||||| ||| Sbjct 29180 GCATAAATGAGCCTTAGCTGATGAGGTGGAGTACCTTCTTTGTCTTGAAATTTTAATTTA 29121 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 ||| |||||| |||||| | || |||||||| | || || | || | || || Sbjct 29120 ACAAGCCATACAGTATCAGAAGGCTCAACTTCAAGCGGAATGGTCATTCCTGATAGTGTC 29061 Query 29770 TTAACAAATATCTGCAT 29786 || ||| | |||||||| Sbjct 29060 TTGACATAAATCTGCAT 29044 >seq431 Length=85469 Score = 100 bits (110), Expect = 2e-16 Identities = 122/166 (73%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 29600 TTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCA 29659 |||||||||||||||| | | |||| | ||| || | |||||| |||||| |||| | Sbjct 84425 TTTGAATGTTATAATCTGAGAGTGTGCAACCATCTTCTAATTGTTTACCAGCAAATATGA 84366 Query 29660 ATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTA 29719 ||| || ||||| || || || || ||| || |||| ||| ||| ||| |||| | Sbjct 84365 GTCTCTGTTGATCAGGTGGGATTCCTACTTCATCCTGTATCTTTGCTTTAACATTTTCAA 84306 Query 29720 CAGTGTCAGA---AAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 ||| ||||| | |||| ||||||||||| || |||| ||||| Sbjct 84305 TAGTATCAGAGCTAGGTTCAACTTCAAGAGTAATTCTTTTACCAGT 84260 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 29570 AACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAG 29629 |||| || || ||||| | ||| ||| ||||||| |||||||| | | || | | Sbjct 84221 AACGAAGTACTAAATGTATTGTGCTTTCCGTTTGAATATTATAATCTGAGAGTGTACAAC 84162 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || | |||| | ||||||||||| | ||| || ||||| || || || || |||| Sbjct 84161 CATCTTCCAATTGTCTACCAGCATATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTT 84102 Query 29690 --TGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 | || |||| | ||| ||| | || | ||| |||||| | | ||||||||||| Sbjct 84101 CATATCCTGTATAGCTCCTTTAACATTCTCAATAGTATCAGAAGATACAACTTCAAGAGT 84042 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || ||||| ||||| | ||||| ||| Sbjct 84041 AATTGTTTTACCAGTCAGAGTTTTCACA 84014 >seq85 Length=280044 Score = 95.1 bits (104), Expect = 9e-15 Identities = 140/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || ||||||||||| | | ||| ||| ||| || | ||||| |||||| | | Sbjct 114614 CTTTCTGGATGTTATAATCAGAGAGGGTTCGACCATCCTCCAACTGTTTACCAGCAAAGA 114555 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 | | || ||||| || || || || || || ||||| || | || || ||| ||| Sbjct 114554 TGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTT 114495 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 ||| || |||||| | || || || || || || || || ||||| | || || |||| Sbjct 114494 CTATGGTATCAGAAGGCTCGACCTCTAGCGTGATGGTCTTCCCAGTGAGAGTCTTGACAA 114435 Query 29777 ATATCTGCAT-TTTAAA 29792 | |||||||| |||||| Sbjct 114434 AAATCTGCATCTTTAAA 114418 >seq460 Length=79726 Score = 87.8 bits (96), Expect = 1e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 29595 TTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATA 29654 ||| |||||||| ||||||| | | || || ||| || | |||| | ||| || | Sbjct 2821 TTCCTTTTGAATCCTATAATCTGAGAGTGTAGGACCATCTTCCAATTGTCTACCATCAAA 2880 Query 29655 TATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGT 29714 || | ||| || |||| || ||||| || ||||| || |||| ||| || ||| | Sbjct 2881 TACAAGTCTCTGTTGATTAGGTGGAATTCCTTCTTTCTCCTGTATCTTTATCTTAACATT 2940 Query 29715 TTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAAC 29774 || | | | |||| |||| ||||||||||| || ||||| ||||| | ||||| | Sbjct 2941 CTCAATACTATCAGTGCGTTCAACTTCAAGAGTAATGGTTTTACCAGTCAGAGTTTTTAA 3000 Query 29775 AAATAT 29780 |||||| Sbjct 3001 AAATAT 3006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385156298279118