Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq78 172 1e-37 seq89 168 1e-36 seq85 145 1e-29 seq431 131 3e-25 seq460 109 1e-18 seq63 105 1e-17 >seq78 Length=312069 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| || | || ||||| | || || ||||| ||||| || || || |||||||| Sbjct 172486 CCTCCCCTGAGGCGGAGAACAAGATGAAGTGTAGACTCTTTTTGGATGTTGTAATCAGAC 172427 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || ||||| || || || ||||||||||| || | || ||||| || || Sbjct 172426 AAAGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCGGGTGGA 172367 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||| || ||| Sbjct 172366 ATTCCTTCCTTGTCTTGAATCTTGGCTTTTACGTTTTCAATGGTATCGGAAGGCTCAACT 172307 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | ||| || ||||| || ||||| ||||| ||||| || |||||| Sbjct 172306 TCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATT 172259 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || |||| || ||||| | || || ||||| || || || || || || ||||| Sbjct 172943 ACCACCCCTCAGGCGGAGAACAAGATGAAGTGTAGACTCCTTTTGAATGTTGTAGTCAGA 172884 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | | || ||||| | || |||||||||||||| || | |||||||| || || Sbjct 172883 CAAAGTACGGCCATCTTCCAACTGCTTTCCAGCAAAGATAAGACGCTGTTGATCAGGTGG 172824 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||||||||||| || || ||||| || || ||||| ||||| |||||| ||| || || Sbjct 172823 GATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTATCAGAAGGCTCAAC 172764 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||| | ||| || ||||| || || | |||||||| || ||||||||| Sbjct 172763 TTCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172715 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| || | || ||||| | || || |||||||| || || || || ||||| || Sbjct 172714 CCTCCCCTGAGGCGGAGAACAAGATGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAA 172655 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| | || ||||| |||||||| || | || ||||| || || Sbjct 172654 AGAGTACGGCCATCTTCCAACTGCTTTCCGGCAAAGATAAGACGCTGCTGATCGGGTGGG 172595 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| || ||||| || || ||||| ||||||||||| || ||| ||| || ||| Sbjct 172594 ATTCCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGCTCAACT 172535 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | ||| || ||||| || || | |||||||| || ||||||||| Sbjct 172534 TCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTTACGAAAATCTGCATT 172487 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | || ||||| | || || || ||||||||||| || || |||||||| Sbjct 172258 CCTCCTCTGAGGCGGAGAACAAGATGGAGTGTGGATTCTTTCTGGATGTTGTAATCAGAC 172199 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || ||||| || || ||||| |||||||| || | || || || || || Sbjct 172198 AAAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCGGGTGGG 172139 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || || ||||| || || || || ||||| || ||| ||| || ||| Sbjct 172138 ATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCAATAGTGTCAGAAGGCTCAACT 172079 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | ||| || ||||| || || | ||||| || || || |||||| Sbjct 172078 TCAAGAGTGATGGTCTTTCCGGTAAGTGTCTTCACGAAGATTTGCATT 172031 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| || | || ||||| | || || ||||| || ||||| || || || || || Sbjct 172030 CCTCCCCTGAGGCGGAGAACAAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAA 171971 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| ||||| || ||||| ||||| || | || || || || || Sbjct 171970 AGAGTACGGCCATCTTCAAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGTGGG 171911 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| ||||| ||||| || || || || || || || ||| ||| || ||| Sbjct 171910 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATTGTGTCAGAAGGCTCAACT 171851 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || || | || || || || || ||||| Sbjct 171850 TCAAGGGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATTTGCAT 171804 >seq89 Length=276290 Score = 168 bits (186), Expect = 1e-36 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || ||||| |||| ||| |||||| || || |||||||| || || | | ||| Sbjct 106367 ACGAAGTACTAAATGCAACGTACTTTCTTTTTGAATGTTATAATCTGAGAGTGTACGACC 106308 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| | |||| | |||||||| || ||||| |||||||| || || |||||||| || Sbjct 106307 ATCTTCCAATTGTCTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCTTT 106248 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| || ||||||||||| | ||| || || |||||| |||||| ||||| | ||| || Sbjct 106247 ATCCTGTATCTTTGCTTTAATATTCTCCATAGTATCAGAAGGTTCAACTTCAAGAGTAAT 106188 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || |||| || ||||||||||| ||||| Sbjct 106187 TGTTTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106152 Score = 163 bits (180), Expect = 6e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652 |||| || ||||| || | ||| ||| || || || |||||||| || || | | | Sbjct 106597 AAACAAAGTACTAAATGTAATGTACTTTCCTTTTGAATGTTATAATCTGAGAGTGTACGA 106538 Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| | | ||| |||||||| || ||||| |||||||| || || |||||||| Sbjct 106537 CCATCTTCCAATATTTTACCAGCAAATATGAGTCTCTGTTGATCAGGTGGGATTCCTTCT 106478 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||| || ||||||||||| ||||| ||||| |||||| |||||| ||||| | ||| Sbjct 106477 TTATCCTGTATCTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTCAACTTCAAGAGTA 106418 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || || |||| || ||||||||||| ||||| Sbjct 106417 ATTGTTTTACCAGTCAGAGTTTTTACAAATATTTGCAT 106380 Score = 140 bits (154), Expect = 6e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 82629 ATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTT 82688 || |||||||| || || | | | | ||| | | | ||| |||||||| || ||||| Sbjct 107986 ATGTTATAATCTGAGAGTGTACGATCATCTACCAATACTTTACCAGCAAATATGAGTCTC 107927 Query 82689 TGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTA 82748 |||||||| || || |||||||| ||||| || ||||||||||| ||||| ||||| ||| Sbjct 107926 TGTTGATCAGGTGGGATTCCTTCTTTATCCTGTATCTTTGCTTTAACATTCTCAATAGTA 107867 Query 82749 TCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGC 82808 ||| |||||| ||||| | ||| || || | || |||| || ||||||||||| ||| Sbjct 107866 TCAGAAGGTTCAACTTCAAGAGTAATTGTTCTACCAGTCAGAGTTTTTACAAATATTTGC 107807 Query 82809 AT 82810 || Sbjct 107806 AT 107805 Score = 100 bits (110), Expect = 6e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 ||| | |||||| |||||||| || ||| | |||||||| || || |||| ||| ||||| Sbjct 106772 TTCCAATTGTTTACCAGCAAATATAAGTTTCTGTTGATCAGGTGGGATTCTTTCTTTATC 106713 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767 || ||||||||||| ||||| ||||| |||| | |||||| |||| || Sbjct 106712 CTGTATCTTTGCTTTAACATTCTCAATAGTATTAGAAGGTTCAACTTGCA 106663 >seq85 Length=280044 Score = 145 bits (160), Expect = 1e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| || ||||||||||| || ||| ||| || || | ||||| |||||||||| Sbjct 114614 CTTTCTGGATGTTATAATCAGAGAGGGTTCGACCATCCTCCAACTGTTTACCAGCAAAGA 114555 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | |||| || || || ||||| || |||||||| || || ||||| || |||||||||| Sbjct 114554 TGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTT 114495 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | || |||||| ||| || || || | || || ||||| || || | ||||| |||| Sbjct 114494 CTATGGTATCAGAAGGCTCGACCTCTAGCGTGATGGTCTTCCCAGTGAGAGTCTTGACAA 114435 Query 82801 ATATCTGCAT 82810 | |||||||| Sbjct 114434 AAATCTGCAT 114425 >seq431 Length=85469 Score = 131 bits (144), Expect = 3e-25 Identities = 129/166 (78%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 82626 TGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGT 82685 || || |||||||| || || | | ||| ||||||| |||||| |||||||| || ||| Sbjct 84423 TGAATGTTATAATCTGAGAGTGTGCAACCATCTTCTAATTGTTTACCAGCAAATATGAGT 84364 Query 82686 CTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATC 82745 || |||||||| || || |||||| | | ||| || ||||||||||| ||||||||||| Sbjct 84363 CTCTGTTGATCAGGTGGGATTCCTACTTCATCCTGTATCTTTGCTTTAACATTTTCAATA 84304 Query 82746 GTATCA---TTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCA 82788 |||||| ||||||| ||||| | ||| || | || || |||| Sbjct 84303 GTATCAGAGCTAGGTTCAACTTCAAGAGTAATTCTTTTACCAGTCA 84258 Score = 109 bits (120), Expect = 1e-18 Identities = 160/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 82578 CACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAA 82637 |||| ||| |||| |||| || ||||| || | || ||| | || ||||||||| Sbjct 84236 CACC-ACCACCTCGATAACGAAGTACTAAATGTATTGTGCTTTCCGTTTGAATATTATAA 84178 Query 82638 TCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCT 82697 || || || | | ||| ||||| | |||| | |||||| | || ||||| |||||||| Sbjct 84177 TCTGAGAGTGTACAACCATCTTCCAATTGTCTACCAGCATATATGAGTCTCTGTTGATCA 84118 Query 82698 GGAGGTATTCCTTC--CTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755 || || |||||||| | |||| || || | |||| ||||| ||||| |||||| || Sbjct 84117 GGTGGGATTCCTTCTTCATATCCTGTATAGCTCCTTTAACATTCTCAATAGTATCAGAAG 84058 Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACA 82799 | | ||||| | ||| || || || || |||| || || ||| Sbjct 84057 ATACAACTTCAAGAGTAATTGTTTTACCAGTCAGAGTTTTCACA 84014 Score = 109 bits (120), Expect = 1e-18 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 82619 TTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 82678 ||| || || ||||||||||| || || | | ||| ||||||| |||||| |||||||| Sbjct 84664 TTCCTTTTGAATATTATAATCTGAGAGTGTACAACCATCTTCTAATTGTTTACCAGCAAA 84605 Query 82679 GATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATT 82738 | || || |||||||| | | |||||| | | ||| || ||||||||||| ||||| Sbjct 84604 TACAAGCCTCTGTTGATCAGATGAGATTCCTACTTCATCCTGTATCTTTGCTTTAACATT 84545 Query 82739 TTCAATCGTATCA 82751 |||||| |||||| Sbjct 84544 TTCAATAGTATCA 84532 >seq460 Length=79726 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670 || |||| ||| || || ||| ||||| || || | | ||| ||||||| | |||| Sbjct 2354 AGTGTAGCTTCATTTTGAATAAAATAATTTGAGAGTTTACAACCATCTTCTAATCGTTTA 2413 Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 ||| ||| |||||| |||| |||||||| | ||||||| | || | ||||||||| Sbjct 2414 CCATTAAATATTAGTTTTTGCTGATCTGGCTGGATTCCTTTTTCATGCAGTATCTTTGCT 2473 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 || ||||| ||||| ||||| || | | ||||| | ||| || || || || ||| Sbjct 2474 TTAACATTCTCAATTGTATCGCTACGGTTGACTTCAAGAGTAATAGTTTTAAAAGTAAAC 2533 Query 82791 GTCTTTACAAATATCTGCAT 82810 | ||||||||||| | ||| Sbjct 2534 GCTTTTACAAATATTTTCAT 2553 >seq63 Length=354714 Score = 105 bits (116), Expect = 1e-17 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 |||| ||| || | ||| || || || || |||||||| || || | | ||| ||| Sbjct 352481 AGAAGTAAATGTATTGTATCTTTATTTTGAATGTTATAATCTGACAGTGTACGACCATCT 352540 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 |||| | | | |||||| || ||||| || ||||| || || |||||||| |||||| Sbjct 352541 TCTAATCTTCTAAAAGCAAATATGAGTCTCTGCTGATCAGGTGGGATTCCTTCTTTATCT 352600 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTC 82759 | ||||||||||| ||||| ||||| |||||| |||||| Sbjct 352601 TTTATCTTTGCTTTAACATTCTCAATAGTATCAGAAGGTTC 352641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981658657701922