Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq97 129 8e-25 seq576 98.7 1e-15 >seq97 Length=262405 Score = 129 bits (142), Expect = 8e-25 Identities = 215/311 (69%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 69745 TTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATA 69804 ||||| ||||| ||||| | ||||| || ||||| ||| | || |||||||| || | Sbjct 93739 TTATTCCCTCCTTGATCAACATATCTTGCTGTGTTGTTAAAAACCCTCAGCATTGGTACC 93680 Query 69805 ATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTA 69864 | |||||||| | ||||| || |||| ||||||||| || | || || || | Sbjct 93679 AGGCCATTAGAAGTGCCATTGGTGCCAGCAATATAACTACCAGACGATCGTATCTTGTGA 93620 Query 69865 ATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCA 69924 | || |||||| || || || || | || || || ||||| | ||||| || ||| Sbjct 93619 ACAGCTAGACCAATACCCCCGGCACTCTTTGATATATTGGCACATCTCTTCAAGGTATCA 93560 Query 69925 TATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 69984 ||||||||||||||| || || ||| | || || |||||| || | ||| || Sbjct 93559 TATATACCCTCTATGGAGTCGTCGGCCATTGTGAGGAGGAAACAGGAGGAGAGCTGAGGA 93500 Query 69985 TGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGC 70044 | ||| || | ||| || ||||| || || || ||||||||||| ||||| | | Sbjct 93499 CGACAAGTACCAGAATTGAACAATGTCGGTGAAGCATGAGTGAACCAACGCTCAGACATC 93440 Query 70045 AGATTGTATGT 70055 || || || || Sbjct 93439 AGGTTATAGGT 93429 Score = 96.9 bits (106), Expect = 5e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||| ||| | || |||||||||||||| |||| | ||||||||||||| ||||| Sbjct 95050 ATAAAGCTGATCAAATTCATCTCCCCATGTCTCATAGAGGCCAGGACATTCATCAGGACA 94991 Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAG 69626 ||||| |||||||| | ||||| || ||| | |||| |||||||| ||| ||||||| Sbjct 94990 CATCAGTGACCACATACCATCAGACTCAACCCTCCTCATGAATAGATCAGGAGTCCAAAG 94931 Query 69627 AGC 69629 || Sbjct 94930 GGC 94928 >seq576 Length=57293 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/148 (75%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 39692 CGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCT 39751 || || |||||||| ||||| || |||||||| || || ||||| || || || || ||| Sbjct 19094 CGTTTCTTGAGCCAGAATATTGCTGCAAAAGAGCCGGAGAAGAATATTCCCTCAACAGCT 19035 Query 39752 GCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TGTATCCACTTCTGTGCC 39808 ||||| |||| | |||||| || || ||| | | || ||||| || ||| Sbjct 19034 GCAAAAGCAATGACTCTCTCGCCAAAAGAATCATCCTCAGACTGAATCCAATTGATGGCC 18975 Query 39809 CAATCAGCTTTCTTCTTTACACAAGGCA 39836 ||||||||||||||||| |||||||||| Sbjct 18974 CAATCAGCTTTCTTCTTAACACAAGGCA 18947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686793759948720