Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq67 118 8e-22 >seq67 Length=335779 Score = 118 bits (130), Expect = 8e-22 Identities = 201/285 (71%), Gaps = 20/285 (7%) Strand=Plus/Minus Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATA---TGA 40921 ||||||||| |||||||| || || ||||| | ||| || |||||||| |||| ||| Sbjct 317996 AGGTGATCTAGGTCCTGTCTACGGGTTTCAATGGCGCCACTTTGGAGCCCAATACAGTGA 317937 Query 40922 CACTATGTACTCTGATTATACCAATA---AAGGAATGGATCAATTA---CAGTGCGTTAT 40975 || || | | |||||| | || |||| | ||||||||| ||| || || Sbjct 317936 CA---TGCATTTTGATTA---CGATGGGCAAGGTGTAGATCAATTAGCTCAG---GTCAT 317886 Query 40976 AGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAAC 41035 | | ||||| || || | || | | || ||||| ||| ||| ||| ||||| || Sbjct 317885 ACACACGATAAAGACCAACCCGTCTTGTCGCCGTATCATAATGTCCGCATGGAATCCTGT 317826 Query 41036 GGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGT-CAGTTTTACGTTTGCA 41094 ||| ||| | |||||| |||| || || ||| || ||| |||||||| || | Sbjct 317825 GGATATACCTGAGATGGCTCTGCCCCCGTGCCATGCCTT-TGTGCAGTTTTATGTCAGTG 317767 Query 41095 ATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGG 41139 ||||||| || || ||||| ||||||||||||||||| || |||| Sbjct 317766 ATGGTGAGCTCTCGTGTCAGTTGTATCAAAGATCAGGAGATATGG 317722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397391100154990