Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq78 167 3e-36 seq85 149 7e-31 seq89 122 1e-22 seq460 86.0 7e-12 seq431 86.0 7e-12 seq523 82.4 9e-11 >seq78 Length=312069 Score = 167 bits (184), Expect = 3e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||| | Sbjct 172259 AATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTTGAAGTTGAGCCTTC 172318 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||||| ||| | || || || ||||| |||||||| |||||||| || || || Sbjct 172319 CGATACCATTGAAAACGTAAAAGCCAAGATTCAAGACAAGGAAGGAATTCCACCCGATCA 172378 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || |||||||| ||||| || || |||| || || | | || || || Sbjct 172379 GCAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACTTTGTCTGATTACAA 172438 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 ||||||| || || || |||||||| || Sbjct 172439 CATCCAAAAAGAGTCTACACTTCATCTTGT 172468 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| |||||||| ||||| || |||||||| |||||| | Sbjct 172715 AATGCAGATTTTCGTAAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTC 172774 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||||| ||| | |||||||| || ||||||||||| ||||| || || || || Sbjct 172775 TGATACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCACCTGATCA 172834 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||||| || |||||||| ||||| | || |||| ||||| | | ||||| || Sbjct 172835 ACAGCGTCTTATCTTTGCTGGAAAGCAGTTGGAAGATGGCCGTACTTTGTCTGACTACAA 172894 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| || || |||||||| || | || || | ||||| Sbjct 172895 CATTCAAAAGGAGTCTACACTTCATCTTGTTCTCCGCCTGAGGGGTGG 172942 Score = 158 bits (174), Expect = 1e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| || ||||| |||||||| ||||| || |||||||| |||||| | Sbjct 172031 AATGCAAATCTTCGTGAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTC 172090 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| || | |||||||| || ||||||||||| ||||| || || ||||| Sbjct 172091 TGACACTATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCACCCGACCA 172150 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || ||||| || ||||| || || |||| || || | | || || || Sbjct 172151 GCAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTTTGTCTGATTACAA 172210 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| || |||||||| || ||||| || Sbjct 172211 CATCCAGAAAGAATCCACACTCCATCTTGT 172240 Score = 154 bits (170), Expect = 2e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| |||||||| ||||| || |||||||| |||||| | Sbjct 172487 AATGCAGATTTTCGTAAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTC 172546 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| |||| | || |||||||| || ||||| || ||||| || || || || Sbjct 172547 TGACACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGAATCCCACCCGATCA 172606 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || ||||| || ||||| | || |||| ||||| || | || || || Sbjct 172607 GCAGCGTCTTATCTTTGCCGGAAAGCAGTTGGAAGATGGCCGTACTCTTTCCGATTACAA 172666 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 ||||||||||||| || || ||||| || Sbjct 172667 CATCCAAAAGGAATCTACACTCCATCTTGT 172696 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || || || |||||||| ||||| || || ||||| |||||| | | Sbjct 171804 ATGCAAATCTTCGTGAAAACACTTACCGGAAAGACCATCACCCTTGAAGTTGAGCCTTCT 171863 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || || |||||||| ||||| || || |||||| Sbjct 171864 GACACAATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAG 171923 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| |||||||| || |||| ||||| || | ||||| || Sbjct 171924 CAGCGTCTTATCTTCGCTGGCAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 171983 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || ||||| || || |||||||| || Sbjct 171984 ATTCAGAAGGAGTCTACCCTTCATCTTGT 172012 >seq85 Length=280044 Score = 149 bits (164), Expect = 7e-31 Identities = 150/194 (77%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || || || ||||| || || || ||||| ||| | | Sbjct 114425 ATGCAGATTTTTGTCAAGACTCTCACTGGGAAGACCATCACGCTAGAGGTCGAGCCTTCT 114484 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| | ||||| || || ||||||||||| || || ||||| |||||| Sbjct 114485 GATACCATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAG 114544 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||||||||| || | ||||||| ||| ||||| | || ||||| Sbjct 114545 CAGCGACTCATCTTTGCTGGTAAACAGTTGGAGGATGGTCGAACCCTCTCTGATTATAAC 114604 Query 27586 GTCCA-AAAGGAAT 27598 |||| ||||| || Sbjct 114605 ATCCAGAAAGGTAT 114618 >seq89 Length=276290 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || || || || || || ||||||||||| ||||| | | Sbjct 106152 ATGCAAATATTTGTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTCT 106211 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | || || || || ||||| || || ||||| || || || || Sbjct 106212 GATACTATGGAGAATATTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAA 106271 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||||| ||| | || |||| |||||| || |||| ||||| Sbjct 106272 CAGAGACTCATATTTGCTGGTAGACAATTGGAAGATGGTCGTACACTCTCAGATTATAAC 106331 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| ||| || | ||| |||| | |||| ||| ||||| Sbjct 106332 ATTCAAAAAGAAAGTACGTTGCATTTAGTACTTCGTCGTCGAGGTGG 106378 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || || || || || || ||||||||||| ||||| | | Sbjct 106380 ATGCAAATATTTGTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTCT 106439 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || || || || ||||| || || ||||| || || || || Sbjct 106440 GATACTATTGAGAATGTTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAA 106499 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||||||||| | | || |||| |||||| || |||| ||||| Sbjct 106500 CAGAGACTCATATTTGCTGGTAAAATATTGGAAGATGGTCGTACACTCTCAGATTATAAC 106559 Query 27586 GTCCAAAAGGAA 27597 | ||||||||| Sbjct 106560 ATTCAAAAGGAA 106571 Score = 102 bits (112), Expect = 9e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || || || || | || ||||||||||| ||||| | | Sbjct 107805 ATGCAAATATTTGTAAAAACTCTGACTGGTAGAACAATTACTCTTGAAGTTGAACCTTCT 107864 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || || || || ||||| || || ||||| || || || || Sbjct 107865 GATACTATTGAGAATGTTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCAA 107924 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | || || ||||||||||| | | | ||||||||||| || |||| ||||| Sbjct 107925 CAGAGACTCATATTTGCTGGTAAAGTATTGGTAGATGATCGTACACTCTCAGATTATAA 107983 >seq460 Length=79726 Score = 86.0 bits (94), Expect = 7e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 27411 AATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAG 27470 ||| ||| | || || || || || || || ||||||||||| ||||| |||||| Sbjct 3007 AATATTTTTAAAAACTCTGACTGGTAAAACCATTACTCTTGAAGTTGAACGCACTGATAG 2948 Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530 |||| ||| | ||| || || ||||| || || |||||||| || | || ||| | Sbjct 2947 TATTGAGAATGTTAAGATAAAGATACAGGAGAAAGAAGGAATTCCACCTAATCAACAGAG 2888 Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCA 27590 || | |||| ||||| ||| | || |||| || ||| || |||| |||| | || Sbjct 2887 ACTTGTATTTGATGGTAGACAATTGGAAGATGGTCCTACACTCTCAGATTATAGGATTCA 2828 Query 27591 AAAGGAA 27597 ||||||| Sbjct 2827 AAAGGAA 2821 >seq431 Length=85469 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/221 (70%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 27417 TGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGC 27476 ||| || || || || || || || ||||||||||| |||| || ||||| |||| Sbjct 84014 TGTGAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGTATCTTCTGATACTATTGA 84073 Query 27477 AAAT-TTGAAG--GCTAAAATTCAGGACA--AGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 ||| || ||| ||| || ||||| | | || ||||| || || || || ||| | Sbjct 84074 GAATGTTAAAGGAGCT---ATACAGGATATGAAGAAGGAATCCCACCTGATCAACAGAGA 84130 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 || || | |||||||| ||| | || |||| | |||| || |||| |||||| | ||| Sbjct 84131 CTCATATATGCTGGTAGACAATTGGAAGATGGTTGTACACTCTCAGATTATAATATTCAA 84190 Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||| | ||| |||| | ||| ||| ||||| Sbjct 84191 ACGGAAAGCACAATACATTTAGTACTTCGTTATCGAGGTGG 84231 >seq523 Length=66199 Score = 82.4 bits (90), Expect = 9e-11 Identities = 164/240 (68%), Gaps = 5/240 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || | ||||||||| || | || | ||| ||| | ||||| |||||| | | Sbjct 29044 ATGCAGATTTATGTCAAGACACTATCAGGAATGACCATTCCGCTTGAAGTTGAGCCTTCT 29103 Query 27466 GATA--GCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| | || || || || ||| |||| ||||| || || | ||| || | | Sbjct 29104 GATACTGTATGGCTTGTT--AAATTAAAATTTCAAGACAAAGAAGGTACTCCACCTCATC 29161 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||| | || |||| |||||| || ||| | || ||||||||||| || | || |||| Sbjct 29162 AGCTAAGGCTCATTTATGCTGGCAAACAAATGGAAAATGATCGTACCTTATCCGATTATA 29221 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA-CAAGTTTAA 27642 || | |||| ||||| || ||| | | | |||||||| || | | ||||| ||| Sbjct 29222 ATATTCAAAGAGAATCTACAATTCTTGCAATTACTCGTCTTCGTGGAGCACCAAGTGTAA 29281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570214887265760