Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq89 154 1e-32 seq78 154 1e-32 seq431 111 1e-19 seq460 104 2e-17 seq523 82.4 7e-11 >seq89 Length=276290 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| |||||||||||||||||||| || || | |||||||||||||| ||||| || Sbjct 106379 CATGCAAATATTTGTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTC 106438 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||||| || ||| ||| || || || |||||||| || ||||| ||||| Sbjct 106439 TGATACTATTGAGAATGTTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCA 106498 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | | |||| || || ||| ||||||||| || || | || ||||| || Sbjct 106499 ACAGAGACTCATATTTGCTGGTAAAATATTGGAAGATGGTCGTACACTCTCAGATTATAA 106558 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||||||||| || |||||||| || Sbjct 106559 CATTCAAAAGGAAAGTACATTACATTTAGT 106588 Score = 149 bits (164), Expect = 5e-31 Identities = 183/248 (74%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| |||||||||||||||||||| || || | |||||||||||||| ||||| || Sbjct 106151 CATGCAAATATTTGTAAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGAACCTTC 106210 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || |||| | ||| ||| || || || |||||||| || ||||| ||||| Sbjct 106211 TGATACTATGGAGAATATTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCA 106270 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | | |||| || || | |||||||||||| || || | || ||||| || Sbjct 106271 ACAGAGACTCATATTTGCTGGTAGACAATTGGAAGATGGTCGTACACTCTCAGATTATAA 106330 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACAC 27226 ||||||||| || || || ||||| || | ||| || |||||||| |||| | Sbjct 106331 CATTCAAAAAGAAAGTACGTTGCATTTAGTACTTCGTCGTCGAGGTGGCAT-GCAAATA- 106388 Query 27227 TTTTGTAA 27234 ||||||| Sbjct 106389 -TTTGTAA 106395 Score = 127 bits (140), Expect = 2e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| |||||||||||||||||||| || | | |||||||||||||| ||||| || Sbjct 107804 CATGCAAATATTTGTAAAAACTCTGACTGGTAGAACAATTACTCTTGAAGTTGAACCTTC 107863 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||||| || ||| ||| || || || |||||||| || ||||| ||||| Sbjct 107864 TGATACTATTGAGAATGTTAAAGCAAAGATACAGGATAAAGAAGGAATCCCACCTGATCA 107923 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG-ACCGTTTCCGATTACA 27165 |||| | | |||| || || ||| ||||| ||| | ||| || | || ||||| | Sbjct 107924 ACAGAGACTCATATTTGCTGGTAAAGTATTGGTAGA-TGATCGTACACTCTCAGATTATA 107982 Query 27166 ACATTCAAA 27174 ||||| ||| Sbjct 107983 ACATTAAAA 107991 Score = 93.3 bits (102), Expect = 4e-14 Identities = 130/180 (72%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 27055 TTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTT 27114 |||| | || ||| | ||||| || ||||||||||| || ||||| ||||||||| | Sbjct 105991 TTGAAAGTGTGAAAGAGAAAATACAGGACAAAGAAGGAATCCCACCTGATCAACAGAGAC 106050 Query 27115 TAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAA 27174 | |||| | || |||||||||||| | || || | || ||||| |||||||||| Sbjct 106051 TGATATTTGTTGGTAAACAATTGGAAAATGGTCGTACACTCTCAGATTATAACATTCAAA 106110 Query 27175 AGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACTTTTGTAA 27234 | || || |||||||| || | ||| | | |||||||| |||| | ||||||| Sbjct 106111 ATGAAAGTACTTTACATTTAGTACTTCGTCTTAGAGGTGGCAT-GCAAATA--TTTGTAA 106167 >seq78 Length=312069 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || || ||||| ||| | || ||||||||||| || || || Sbjct 172488 ATGCAGATTTTCGTAAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTCT 172547 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||| |||||||||||||| || ||||||||||| Sbjct 172548 GACACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGAATCCCACCCGATCAG 172607 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| || || |||||||| | || |||||||||||||| Sbjct 172608 CAGCGTCTTATCTTTGCCGGAAAGCAGTTGGAAGATGGCCGTACTCTTTCCGATTACAAC 172667 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || |||||||| || || | ||| | ||| Sbjct 172668 ATCCAAAAGGAATCTACACTCCATCTTGTT 172697 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || || ||||| ||| | || ||||||||||| || || || Sbjct 172716 ATGCAGATTTTCGTAAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTCT 172775 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| ||||| || || || ||||| ||||| || ||||| |||||| Sbjct 172776 GATACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCACCTGATCAA 172835 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || |||||||| | || | || || |||||| Sbjct 172836 CAGCGTCTTATCTTTGCTGGAAAGCAGTTGGAAGATGGCCGTACTTTGTCTGACTACAAC 172895 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| || | ||| | ||| | || || ||||||| Sbjct 172896 ATTCAAAAGGAGTCTACACTTCATCTTGTTCTCCGCCTGAGGGGTGG 172942 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| ||||||| ||| | |||||||||||||| || || ||| Sbjct 172260 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTTGAAGTTGAGCCTTCC 172319 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| || ||||||||||| ||||| || ||||||||||| Sbjct 172320 GATACCATTGAAAACGTAAAAGCCAAGATTCAAGACAAGGAAGGAATTCCACCCGATCAG 172379 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | ||||| | || | || ||||||||| Sbjct 172380 CAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACTTTGTCTGATTACAAC 172439 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || ||||| ||||| || | ||| | ||| Sbjct 172440 ATCCAAAAAGAGTCTACACTTCATCTTGTT 172469 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || ||||| ||| | || || |||||||| || || || Sbjct 171804 ATGCAAATCTTCGTGAAAACACTTACCGGAAAGACCATCACCCTTGAAGTTGAGCCTTCT 171863 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || |||||||| ||||| || ||||| || || Sbjct 171864 GACACAATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAG 171923 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| ||| | ||||| | || ||||||| |||||| Sbjct 171924 CAGCGTCTTATCTTCGCTGGCAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 171983 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||| |||||||| ||| | ||| | ||| Sbjct 171984 ATTCAGAAGGAGTCTACCCTTCATCTTGTT 172013 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||| ||| | || ||||||||||| || || || Sbjct 172032 ATGCAAATCTTCGTGAAGACACTTACCGGAAAGACCATCACTCTTGAAGTTGAGCCTTCT 172091 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || || || ||||| ||||| || |||||||| || Sbjct 172092 GACACTATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCACCCGACCAG 172151 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| || || | ||||| | || | || ||||||||| Sbjct 172152 CAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTTTGTCTGATTACAAC 172211 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || || || || || | ||| | ||| Sbjct 172212 ATCCAGAAAGAATCCACACTCCATCTTGTT 172241 >seq431 Length=85469 Score = 111 bits (122), Expect = 1e-19 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 26999 TGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGA 27058 ||| ||||||||||| || || | |||||||||||||| | | | || || | ||||| Sbjct 84014 TGTGAAAACTCTGACTGGTAAAACAATTACTCTTGAAGTTGTATCTTCTGATACTATTGA 84073 Query 27059 GATGGTCAAACAAAAAATTCAAGACA--AAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || || ||| | || || || | ||||||| || ||||| ||||||||| | | Sbjct 84074 GAATGTTAAAGGAGCTATACAGGATATGAAGAAGGAATCCCACCTGATCAACAGAGACTC 84133 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 ||||| || || | |||||||||||| ||| || | || ||||| || ||||||| | Sbjct 84134 ATATATGCTGGTAGACAATTGGAAGATGGTTGTACACTCTCAGATTATAATATTCAAACG 84193 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||| || | |||| || ||||| Sbjct 84194 GAAAGCACAATACATTTAGTACTTCGTTATCGAGGTGG 84231 Score = 105 bits (116), Expect = 6e-18 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 27001 TAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGA 27060 |||||||||||||||| || | |||||||||| ||| ||||| || || | ||||||| Sbjct 81036 TAAAAACTCTGACCGGTAAAGCGATTACTCTTGGAGTTGAACCTTCTGATACTATTGAGA 81095 Query 27061 TGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATAT 27120 || ||| || || || || |||||||| || ||||| ||||||||| | | ||| Sbjct 81096 ATGTTAAAGCGAAGATACAGGATAAAGAAGGAATCCCACCTGATCAACAGAGGCTTTTAT 81155 Query 27121 ACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGA 27178 || || ||| ||||||||| ||| || | || ||||| || ||| || ||| Sbjct 81156 TTGCTGGTAAAGTATTGGAAGATAGTCGTACACTCTCAGATTATAAAATTTCAATGGA 81213 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC---GTCCGAC 27050 |||||||| | ||||||| || || |||||||||||||| ||||| || || Sbjct 84245 ATATTTGTCA---CTCTGACTGGTAAAAGAATTACTCTTGAAGTTGAACCTAGCTCTGAT 84301 Query 27051 TCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAG 27110 | ||||| | || ||| ||| || || || ||| ||| || ||||| ||||||||| Sbjct 84302 ACTATTGAAAATGTTAAAGCAAAGATACAGGATGAAGTAGGAATCCCACCTGATCAACAG 84361 Query 27111 CGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATT 27170 | | |||| || || |||||||| ||||| ||| || | || ||||| |||||| Sbjct 84362 AGACTCATATTTGCTGGTAAACAATTAGAAGATGGTTGCACACTCTCAGATTATAACATT 84421 Query 27171 CAAA 27174 |||| Sbjct 84422 CAAA 84425 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||||||||||||||| || || | ||| |||||||| || ||| || | ||| Sbjct 84482 TTTGTAAAAACTCTGACTGGTAAAACAATTTTTCTTGAAGCTTTACTGTCTGATACTATT 84541 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | || ||| ||| || || || ||| ||| || || | ||||||||| | | Sbjct 84542 GAAAATGTTAAAGCAAAGATACAGGATGAAGTAGGAATCTCATCTGATCAACAGAGGCTT 84601 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 ||| || || |||||||| ||||| ||| || | || ||||| || ||||||||| Sbjct 84602 GTATTTGCTGGTAAACAATTAGAAGATGGTTGTACACTCTCAGATTATAATATTCAAAAG 84661 Query 27177 GAGTCGACCTTACATTTG 27194 || || |||||||| Sbjct 84662 GAAAGTACAATACATTTG 84679 >seq460 Length=79726 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053 |||||| ||||||||||||| || || | |||||||||||||| |||| | || Sbjct 3006 ATATTTTTAAAAACTCTGACTGGTAAAACCATTACTCTTGAAGTTGAACGCACTGATAGT 2947 Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113 ||||||| || || ||| || || || |||||||| || ||||| |||||||| | Sbjct 2946 ATTGAGAATGTTAAGATAAAGATACAGGAGAAAGAAGGAATTCCACCTAATCAACAGAGA 2887 Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173 | ||| | || | |||||||||||| || | || | || ||||| | |||||| Sbjct 2886 CTTGTATTTGATGGTAGACAATTGGAAGATGGTCCTACACTCTCAGATTATAGGATTCAA 2827 Query 27174 AAGGA 27178 ||||| Sbjct 2826 AAGGA 2822 >seq523 Length=66199 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| | ||| || || || | || | | | ||| | |||||||| || || || Sbjct 29043 CATGCAGATTTATGTCAAGACACTATCAGGAATGACCATTCCGCTTGAAGTTGAGCCTTC 29102 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | | | | || ||| |||| |||||||||||||||| | ||||| |||| Sbjct 29103 TGATACTGTATGGCTTGTTAAATTAAAATTTCAAGACAAAGAAGGTACTCCACCTCATCA 29162 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG-ACCGTTTCCGATTACA 27165 | | | || || || ||||||||| ||||| | | ||| ||| | |||||||| | Sbjct 29163 GCTAAGGCTCATTTATGCTGGCAAACAAATGGAA-AATGATCGTACCTTATCCGATTATA 29221 Query 27166 ACATTCAAA 27174 | ||||||| Sbjct 29222 ATATTCAAA 29230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434845562040960