Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq9923 87.8 7e-13 >seq9923 Length=1414 Score = 87.8 bits (96), Expect = 7e-13 Identities = 158/220 (72%), Gaps = 16/220 (7%) Strand=Plus/Plus Query 4561 GGGCGGCGGCATCGGCTACGACTTCTCCACCCTGCGCCCCA--AGGGC-GACCTCATCGT 4617 |||| |||| ||||||||||| ||||| ||| || | |||| |||| | ||| || Sbjct 1130 GGGCTGCGGGATCGGCTACGAGTTCTCGACCTTGAGGCCCAGCGGGGCTTATGTCACCGG 1189 Query 4618 CAAGCTGCAGTCCCGCAGCTCCGGCCCCATCTCCTTCATGGAGATTTTCGA-CGCAGTCT 4676 | || | || || || ||||||||| |||| |||||||| || | ||| |||| | Sbjct 1190 C--GCCGGAG-CCTACACCTCCGGCCCGCTCTCGTTCATGGATATCTACGATCGCA---T 1243 Query 4677 GCCGCTGCACG---TCCTCGTCCGGCCACCGGCGTGGCGCGCAGATGGGCGTCCTGCG-C 4732 | ||| |||| ||||| |||| || || || |||||||| |||| ||| || Sbjct 1244 G-TGCTTCACGGTCTCCTCCGCCGGAGGGCGCCGGGGAGCGCAGAT-GGCGACCTTCGAT 1301 Query 4733 ATCGACCACCCCGACATCTTCGACTTCGTCCGCGCCAAGC 4772 ||| ||| ||||| || |||| ||| |||||||||||| Sbjct 1302 GTCGGCCATCCCGATATTCTCGATTTCATCCGCGCCAAGC 1341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187486965842724